RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 OR5H15A6NDH6 313 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 IDSB3KWA1 339 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 PRICKLE3O43900 615 aaPredicted RBP16.82■□□□□ 0.28
NUP50-218ENST00000493456 OR1I1O60431 355 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 PRAMEF2O60811 474 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 ERVK-10P10266 1014 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 ESRRAP11474 423 aaPredicted RBP16.82■□□□□ 0.28
NUP50-218ENST00000493456 ICAM2P13598 275 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 EMP2P54851 167 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 EMP3P54852 163 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 ADORA2A-AS1P86434 159 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 EEF1A2Q05639 463 aaKnown RBP16.82■□□□□ 0.28
NUP50-218ENST00000493456 NAA25Q14CX7 972 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 LONRF1Q17RB8 773 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 TTC23LQ6PF05 361 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 RNF44Q7L0R7 432 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 VRK3Q8IV63 474 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 CFAP61Q8NHU2 1237 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 MVB12AQ96EY5 273 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 C14orf79Q96F83 325 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 OSBPL8Q9BZF1 889 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 CIDEBQ9UHD4 219 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 CDC14AQ9UNH5 594 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 MRFAP1Q9Y605 127 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 SYCE3A1L190 88 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 CBFA2T2O43439 604 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 F10P00742 488 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 APOA4P06727 396 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 CTNNA1P35221 906 aaKnown RBP16.81■□□□□ 0.28
NUP50-218ENST00000493456 ANP32AP39687 249 aaKnown RBP16.81■□□□□ 0.28
NUP50-218ENST00000493456 DSG2Q14126 1118 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 P3H1Q32P28 736 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 ABHD17BQ5VST6 288 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 AFTPHQ6ULP2 937 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 LAPTM4BQ86VI4 370 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 OR2L3Q8NG85 312 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 HMGCLL1Q8TB92 370 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 RAD51AP1Q96B01 352 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 MTFMTQ96DP5 389 aaKnown RBP16.81■□□□□ 0.28
NUP50-218ENST00000493456 MAGED4Q96JG8 741 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 C10orf90Q96M02 699 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 FAM118BQ9BPY3 351 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 CARD6Q9BX69 1037 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 TEKT2Q9UIF3 430 aa16.81■□□□□ 0.28
NUP50-218ENST00000493456 LOC102723996A0A087X1L8 192 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 LOC105369274A0A096LPK9 316 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 LOC102723532A0A0G2JNH3 316 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 A0A0J9YVX5 310 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 PSMD3O43242 534 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 SLCO2B1O94956 709 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 CLDN14O95500 239 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 MLYCDO95822 493 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 EIF2S1P05198 315 aaKnown RBP16.8■□□□□ 0.28
NUP50-218ENST00000493456 HEXBP07686 556 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 PPARGP37231 505 aaPredicted RBP16.8■□□□□ 0.28
NUP50-218ENST00000493456 TMED2Q15363 201 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 LINC00523Q86TU6 105 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 CDH24Q86UP0 819 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 OR4N4Q8N0Y3 316 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 OR13J1Q8NGT2 312 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 CABS1Q96KC9 395 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 MIPEPQ99797 713 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 ZFYVE21Q9BQ24 234 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 TGIF2Q9GZN2 237 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 ZNF700Q9H0M5 742 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 PIH1D1Q9NWS0 290 aaKnown RBP16.8■□□□□ 0.28
NUP50-218ENST00000493456 TRPC4Q9UBN4 977 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 PCDHGB6Q9Y5F9 930 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 NCOA6Q14686 2063 aaPredicted RBP16.8■□□□□ 0.28
NUP50-218ENST00000493456 MED13LQ71F56 2210 aa16.8■□□□□ 0.28
NUP50-218ENST00000493456 PHF2O75151 1096 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 TJP3O95049 919 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 METTL18O95568 372 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 CELA2AP08217 269 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 ITGAMP11215 1152 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 PSMB5P28074 263 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 CETN2P41208 172 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 MAGEA1P43355 309 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 C3AR1Q16581 482 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 PRTGQ2VWP7 1150 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 GSDMBQ8TAX9 411 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 THAP3Q8WTV1 239 aaPredicted RBP16.79■□□□□ 0.28
NUP50-218ENST00000493456 CHTF18Q8WVB6 975 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 HDAC10Q969S8 669 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 MRFAP1L1Q96HT8 127 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 TUBB6Q9BUF5 446 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 GPAMQ9HCL2 828 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 MKKSQ9NPJ1 570 aaPredicted RBP16.79■□□□□ 0.28
NUP50-218ENST00000493456 TINAGQ9UJW2 476 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 RIMKLBQ9ULI2 386 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 PCDHA3Q9Y5H8 950 aa16.79■□□□□ 0.28
NUP50-218ENST00000493456 OR2A25A4D2G3 310 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 C19orf84I3L1E1 186 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 VPS26AO75436 327 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 GAS8O95995 478 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 GOT2P00505 430 aaKnown RBP16.78■□□□□ 0.28
NUP50-218ENST00000493456 AOAHP28039 575 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 SLC26A3P40879 764 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 PCOLCEQ15113 449 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 CCDC38Q502W7 563 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms