RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PTGISQ16647 500 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 LBHQ53QV2 105 aaPredicted RBP3.59□□□□□ -1.83
CLK1-213ENST00000492793 XKR3Q5GH77 459 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 MPP7Q5T2T1 576 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 C15orf39Q6ZRI6 1047 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 TIGD4Q8IY51 512 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 KLHDC1Q8N7A1 406 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 NIPA2Q8N8Q9 360 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 TMEM178AQ8NBL3 297 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 OR4C3Q8NH37 302 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 DNASE2BQ8WZ79 361 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 ST6GALNAC6Q969X2 333 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 PYCR2Q96C36 320 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 NAF1Q96HR8 494 aaKnown RBP3.59□□□□□ -1.83
CLK1-213ENST00000492793 FSD1Q9BTV5 496 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 OR2B2Q9GZK3 357 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 TLE6Q9H808 572 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 RNF121Q9H920 327 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 RAB9BQ9NP90 201 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 ARMCX3Q9UH62 379 aaPredicted RBP3.59□□□□□ -1.83
CLK1-213ENST00000492793 NOL7Q9UMY1 257 aaKnown RBP3.59□□□□□ -1.83
CLK1-213ENST00000492793 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 TRAV24A0A0B4J272 114 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 IGHV4-61A0A0C4DH41 118 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 FAM170AA1A519 330 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 CASTOR2A6NHX0 329 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 PPIP5K2O43314 1243 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 GRID2O43424 1007 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 ATP6AP2O75787 350 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 CDC123O75794 336 aaPredicted RBP3.58□□□□□ -1.84
CLK1-213ENST00000492793 DFFBO76075 338 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 CLPTM1O96005 669 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 IGHV4-59P01825 116 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 RLN1P04808 185 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 SERPING1P05155 500 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 CD48P09326 243 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 LBPP18428 481 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 ALDH4A1P30038 563 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 HOXC8P31273 242 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 CTNNA1P35221 906 aaKnown RBP3.58□□□□□ -1.84
CLK1-213ENST00000492793 SOAT1P35610 550 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 ALDH3A2P51648 485 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 SP3Q02447 781 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 TNK1Q13470 666 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 RBBP7Q16576 425 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 SLC25A53Q5H9E4 307 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 NHSL2Q5HYW2 709 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 ZNF790Q6PG37 636 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 TMEM182Q6ZP80 229 aaPredicted RBP3.58□□□□□ -1.84
CLK1-213ENST00000492793 PHLDB2Q86SQ0 1253 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 PIGZQ86VD9 579 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 GPRC5AQ8NFJ5 357 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 C9orf43Q8TAL5 461 aaPredicted RBP3.58□□□□□ -1.84
CLK1-213ENST00000492793 METTL21AQ8WXB1 218 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 GIMAP5Q96F15 307 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 MINDY3Q9H8M7 445 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 Q9H8V8 135 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 DDX43Q9NXZ2 648 aaKnown RBP3.58□□□□□ -1.84
CLK1-213ENST00000492793 PKD2L2Q9NZM6 624 aa3.58□□□□□ -1.84
CLK1-213ENST00000492793 A0A087WV48 116 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 ERVV-2B6SEH9 535 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 HHLA1C9JL84 531 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 FPGTO14772 594 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 LINC01565O15544 149 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 EXTL3O43909 919 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 TGDSO95455 350 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 IGKV3-20P01619 116 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 ZFYP08048 801 aaPredicted RBP3.57□□□□□ -1.84
CLK1-213ENST00000492793 PRSS56P0CW18 603 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 PRKAR1AP10644 381 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 ADRA2CP18825 462 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 ALDH1B1P30837 517 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 TIMP3P35625 211 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 CDKN1AP38936 164 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 MAGEA11P43364 429 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 NKX2-1P43699 371 aaPredicted RBP3.57□□□□□ -1.84
CLK1-213ENST00000492793 PTENP60484 403 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 TUBB2AQ13885 445 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 HNRNPDQ14103 355 aaKnown RBP3.57□□□□□ -1.84
CLK1-213ENST00000492793 TAZQ16635 292 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 ZNF876PQ49A33 203 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 CASC4Q6P4E1 433 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 MEX3BQ6ZN04 569 aaKnown RBP3.57□□□□□ -1.84
CLK1-213ENST00000492793 MSANTD1Q6ZTZ1 278 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 USP43Q70EL4 1123 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 PIGWQ7Z7B1 504 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 GLRX5Q86SX6 157 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 C4orf19Q8IY42 314 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 FAM9BQ8IZU0 186 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 KIRREL3Q8IZU9 778 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 TMCO5AQ8N6Q1 288 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 NKAIN3Q8N8D7 197 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 SLC26A7Q8TE54 656 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 HPSE2Q8WWQ2 592 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 ARHGAP45Q92619 1136 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 RAD54LQ92698 747 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 AK8Q96MA6 479 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 TUBB2BQ9BVA1 445 aa3.57□□□□□ -1.84
CLK1-213ENST00000492793 MTMR12Q9C0I1 747 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms