RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 KIRREL2Q6UWL6 708 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 ISLR2Q6UXK2 745 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 KIAA1328Q86T90 577 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 CUZD1Q86UP6 607 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 KCNMB4Q86W47 210 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 DRAXINQ8NBI3 349 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-212ENST00000492407 PPHLN1Q8NEY8 458 aaKnown RBP8.74□□□□□ -1.01
HDAC3-212ENST00000492407 DNAJB14Q8TBM8 379 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 INPP5DQ92835 1189 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 MVB12AQ96EY5 273 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 FOPNLQ96NB1 174 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 TCF12Q99081 682 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 BAG1Q99933 345 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-212ENST00000492407 SELENOSQ9BQE4 189 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 TRIM56Q9BRZ2 755 aaKnown RBP8.74□□□□□ -1.01
HDAC3-212ENST00000492407 BRINP2Q9C0B6 783 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 IL22Q9GZX6 179 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 P2RY12Q9H244 342 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 ZNF304Q9HCX3 659 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 CATSPERZQ9NTU4 200 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 QPCTLQ9NXS2 382 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 SPATA7Q9P0W8 599 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 PAK5Q9P286 719 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 IMPACTQ9P2X3 320 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 GNPTGQ9UJJ9 305 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 CDC14AQ9UNH5 594 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 DRG1Q9Y295 367 aaKnown RBP8.74□□□□□ -1.01
HDAC3-212ENST00000492407 TCAF1Q9Y4C2 921 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 HS3ST3B1Q9Y662 390 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 FAM169AQ9Y6X4 670 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 SPTBN1Q01082 2364 aaKnown RBP8.74□□□□□ -1.01
HDAC3-212ENST00000492407 IGLV3-12A0A075B6K2 115 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 A0A1B0GUH1 482 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 HYKKA2RU49 373 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 CD3EAPO15446 510 aaKnown RBP8.73□□□□□ -1.01
HDAC3-212ENST00000492407 PRPF4O43172 522 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC3-212ENST00000492407 USP1O94782 785 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 C1orf105O95561 183 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 CLDN1O95832 211 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 HPP00738 406 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 RNF224P0DH78 156 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 HSD17B2P37059 387 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 DCTP40126 519 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 CDK16Q00536 496 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 OCA2Q04671 838 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 MFAP5Q13361 173 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 ZNF169Q14929 603 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-212ENST00000492407 ARHGAP19Q14CB8 494 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 INAQ16352 499 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 RBBP7Q16576 425 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 MUM1Q2TAK8 710 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 WASHC2DQ5SRD0 308 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 RNF187Q5TA31 235 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-212ENST00000492407 ATG9BQ674R7 924 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 PTRHD1Q6GMV3 140 aaKnown RBP8.73□□□□□ -1.01
HDAC3-212ENST00000492407 DRICH1Q6PGQ1 229 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-212ENST00000492407 NAPRTQ6XQN6 538 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 COX15Q7KZN9 410 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 OTOAQ7RTW8 1153 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 VRK3Q8IV63 474 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 OR11G2Q8NGC1 345 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 SVIPQ8NHG7 77 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 FAR1Q8WVX9 515 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 RAB6BQ9NRW1 208 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 TREX1Q9NSU2 369 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 PIH1D1Q9NWS0 290 aaKnown RBP8.73□□□□□ -1.01
HDAC3-212ENST00000492407 BFARQ9NZS9 450 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 CPSF2Q9P2I0 782 aaKnown RBP8.73□□□□□ -1.01
HDAC3-212ENST00000492407 ZNF282Q9UDV7 671 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-212ENST00000492407 SLC2A6Q9UGQ3 507 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 PLAGL1Q9UM63 463 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 NOVA2Q9UNW9 492 aaKnown RBP8.73□□□□□ -1.01
HDAC3-212ENST00000492407 ZNF148Q9UQR1 794 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 ZKSCAN5Q9Y2L8 839 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 SHANK1Q9Y566 2161 aa8.73□□□□□ -1.01
HDAC3-212ENST00000492407 PCSK5Q92824 1860 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 ESPL1Q14674 2120 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 MED13Q9UHV7 2174 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 TCRBV7S2A1N4TA0A589 114 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 A1L4Q6 167 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 ZNF839A8K0R7 811 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 FAM25EA8MYX2 175 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 TXNDC9O14530 226 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 NDUFS3O75489 264 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 MATN4O95460 622 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 IFNB1P01574 187 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 APRTP07741 180 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 CYC1P08574 325 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 MYBL2P10244 700 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 ICAM2P13598 275 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 PKMP14618 531 aaKnown RBP8.72□□□□□ -1.01
HDAC3-212ENST00000492407 ACPPP15309 386 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 CBX1P83916 185 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 SEMA3AQ14563 771 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 CCNG2Q16589 344 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 ANKRD20A4Q4UJ75 823 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 SEL1L2Q5TEA6 688 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 GARNL3Q5VVW2 1013 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 HIST2H2BCQ6DN03 193 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 MRNIPQ6NTE8 343 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms