RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 STT3BQ8TCJ2 826 aa11.25□□□□□ -0.61
FDPS-215ENST00000490140 NR4A3Q92570 626 aa11.25□□□□□ -0.61
FDPS-215ENST00000490140 RELTQ969Z4 430 aa11.25□□□□□ -0.61
FDPS-215ENST00000490140 CABS1Q96KC9 395 aa11.25□□□□□ -0.61
FDPS-215ENST00000490140 ZFYVE21Q9BQ24 234 aa11.25□□□□□ -0.61
FDPS-215ENST00000490140 TMEM121Q9BTD3 319 aa11.25□□□□□ -0.61
FDPS-215ENST00000490140 MENTQ9BUN1 341 aa11.25□□□□□ -0.61
FDPS-215ENST00000490140 ZNF160Q9HCG1 818 aa11.25□□□□□ -0.61
FDPS-215ENST00000490140 PIH1D1Q9NWS0 290 aaKnown RBP11.25□□□□□ -0.61
FDPS-215ENST00000490140 TTC7AQ9ULT0 858 aaPredicted RBP11.25□□□□□ -0.61
FDPS-215ENST00000490140 MAU2Q9Y6X3 613 aa11.25□□□□□ -0.61
FDPS-215ENST00000490140 ANKRD17O75179 2603 aaKnown RBP11.25□□□□□ -0.61
FDPS-215ENST00000490140 CROCCQ5TZA2 2017 aa11.25□□□□□ -0.61
FDPS-215ENST00000490140 OTOGQ6ZRI0 2925 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 IGLV3-12A0A075B6K2 115 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 H3BMM5 538 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 TXNDC9O14530 226 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 NDUFS3O75489 264 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 WFS1O76024 890 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 CCNDBP1O95273 360 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 BMP10O95393 424 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 EIF2S1P05198 315 aaKnown RBP11.24□□□□□ -0.61
FDPS-215ENST00000490140 SERPINA7P05543 415 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 PRR35P0CG20 571 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 PKMP14618 531 aaKnown RBP11.24□□□□□ -0.61
FDPS-215ENST00000490140 MCM3P25205 808 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 OR1D4P47884 311 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 TNFSF10P50591 281 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 KLF1Q13351 362 aaPredicted RBP11.24□□□□□ -0.61
FDPS-215ENST00000490140 RNF187Q5TA31 235 aaPredicted RBP11.24□□□□□ -0.61
FDPS-215ENST00000490140 SEL1L2Q5TEA6 688 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 TMEM207Q6UWW9 146 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 GFRALQ6UXV0 394 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 RNF44Q7L0R7 432 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 MCEMP1Q8IX19 187 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 FAM20CQ8IXL6 584 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 C2orf73Q8N5S3 287 aaPredicted RBP11.24□□□□□ -0.61
FDPS-215ENST00000490140 METTL27Q8N6F8 245 aaPredicted RBP11.24□□□□□ -0.61
FDPS-215ENST00000490140 OTUD6BQ8N6M0 293 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 CCDC89Q8N998 374 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 OR2L3Q8NG85 312 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 DNAJB8Q8NHS0 232 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 SLC35B2Q8TB61 432 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 RERGQ96A58 199 aaPredicted RBP11.24□□□□□ -0.61
FDPS-215ENST00000490140 IL17FQ96PD4 163 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 MIPEPQ99797 713 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 RNF32Q9H0A6 362 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.24□□□□□ -0.61
FDPS-215ENST00000490140 FAM114A2Q9NRY5 505 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 ZC3H7BQ9UGR2 993 aaKnown RBP11.24□□□□□ -0.61
FDPS-215ENST00000490140 TFR2Q9UP52 801 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 TCAF1Q9Y4C2 921 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 C2CD3Q4AC94 2353 aa11.24□□□□□ -0.61
FDPS-215ENST00000490140 A0A0J9YVX5 310 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 A0A1W2PQ72 361 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 CTSVO60911 334 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 C1orf105O95561 183 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 IFNB1P01574 187 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 HEXBP07686 556 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 CYC1P08574 325 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 RPS3P23396 243 aaKnown RBP eCLIP11.23□□□□□ -0.612e-12■■■□□ 16.3
FDPS-215ENST00000490140 ATP5DP30049 168 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 SOX11P35716 441 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 HSD17B2P37059 387 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 GDF10P55107 478 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 KIF5AQ12840 1032 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 GRB7Q14451 532 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 ZXDCQ2QGD7 858 aaPredicted RBP11.23□□□□□ -0.61
FDPS-215ENST00000490140 ABHD17BQ5VST6 288 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 GARNL3Q5VVW2 1013 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 SP5Q6BEB4 398 aaPredicted RBP11.23□□□□□ -0.61
FDPS-215ENST00000490140 SDCCAG8Q86SQ7 713 aaPredicted RBP11.23□□□□□ -0.61
FDPS-215ENST00000490140 VRK3Q8IV63 474 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 ZNF808Q8N4W9 903 aaPredicted RBP11.23□□□□□ -0.61
FDPS-215ENST00000490140 TAB3Q8N5C8 712 aaPredicted RBP11.23□□□□□ -0.61
FDPS-215ENST00000490140 LRRC57Q8N9N7 239 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.23□□□□□ -0.61
FDPS-215ENST00000490140 HAS2Q92819 552 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 YIPF2Q9BWQ6 316 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 MKKSQ9NPJ1 570 aaPredicted RBP11.23□□□□□ -0.61
FDPS-215ENST00000490140 ABI3Q9P2A4 366 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 PTGFRNQ9P2B2 879 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 TRPC4Q9UBN4 977 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 CIDEBQ9UHD4 219 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 POLQO75417 2590 aa11.23□□□□□ -0.61
FDPS-215ENST00000490140 TRGV8A0A0C4DH27 118 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 OR2A25A4D2G3 310 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 GRID2IPA4D2P6 1211 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 SOWAHDA6NJG2 315 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 IDSB3KWA1 339 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 CD3EAPO15446 510 aaKnown RBP11.22□□□□□ -0.61
FDPS-215ENST00000490140 RASAL1O95294 804 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 APRTP07741 180 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 COX6A1P12074 109 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 COX6B1P14854 86 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 EZRP15311 586 aaKnown RBP11.22□□□□□ -0.61
FDPS-215ENST00000490140 RPA3P35244 121 aaPredicted RBP11.22□□□□□ -0.61
FDPS-215ENST00000490140 EMP2P54851 167 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 RIPPLY3P57055 190 aa11.22□□□□□ -0.61
FDPS-215ENST00000490140 Q0VFX4 171 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms