RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 EIF2S1P05198 315 aaKnown RBP13.29□□□□□ -0.28
VARS-227ENST00000489979 ITGAMP11215 1152 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 ESRRAP11474 423 aaPredicted RBP13.29□□□□□ -0.28
VARS-227ENST00000489979 PSMA3P25788 255 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 PSMB5P28074 263 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 SMSP52788 366 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 COPS2P61201 443 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 PMP22Q01453 160 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 CDSNQ15517 529 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 C3AR1Q16581 482 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 CCDC38Q502W7 563 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 UNC5DQ6UXZ4 953 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 RIPOR1Q6ZS17 1223 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 AMER2Q8N7J2 671 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 SUN3Q8TAQ9 357 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 ASZ1Q8WWH4 475 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 C10orf90Q96M02 699 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 YIPF2Q9BWQ6 316 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 LRRC40Q9H9A6 602 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 RIC8BQ9NVN3 520 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 A0A1W2PQ72 361 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 IQCF5A8MTL0 148 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 F8W8V4 182 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 PRAMEF2O60811 474 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 METTL18O95568 372 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 TPM1P09493 284 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 AGAP20933 346 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 PARP6Q2NL67 630 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 MUM1Q2TAK8 710 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 MTFMTQ96DP5 389 aaKnown RBP13.28□□□□□ -0.28
VARS-227ENST00000489979 CABS1Q96KC9 395 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 MIPEPQ99797 713 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 RAB11FIP5Q9BXF6 653 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 OSBPL8Q9BZF1 889 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 RNF32Q9H0A6 362 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 TRPC4Q9UBN4 977 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 TINAGQ9UJW2 476 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 EFR3BQ9Y2G0 817 aa13.28□□□□□ -0.28
VARS-227ENST00000489979 SCN2AQ99250 2005 aa13.27□□□□□ -0.28
VARS-227ENST00000489979 GTF3C1Q12789 2109 aa13.27□□□□□ -0.28
VARS-227ENST00000489979 OR5H15A6NDH6 313 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 MFAP3LO75121 409 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 CLDN14O95500 239 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 GOT2P00505 430 aaKnown RBP13.27□□□□□ -0.29
VARS-227ENST00000489979 HEXBP07686 556 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 MYBL2P10244 700 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 ERVK-10P10266 1014 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 CAPN3P20807 821 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 MAGEA1P43355 309 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 KIR3DL1P43629 444 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 PCOLCEQ15113 449 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 KRTAP21-3Q3LHN1 58 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 ABHD17BQ5VST6 288 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 C11orf63Q6NUN7 778 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 SPNS3Q6ZMD2 512 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 RNF44Q7L0R7 432 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 CDH24Q86UP0 819 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 OR2L3Q8NG85 312 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 OR13J1Q8NGT2 312 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 ADAMTS18Q8TE60 1221 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 HDAC10Q969S8 669 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 TTC1Q99614 292 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 CARD6Q9BX69 1037 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 TSSK1BQ9BXA7 367 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 STMN3Q9NZ72 180 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 SLC2A6Q9UGQ3 507 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 TFR2Q9UP52 801 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 KLK4Q9Y5K2 254 aa13.27□□□□□ -0.29
VARS-227ENST00000489979 LOC102723996A0A087X1L8 192 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 KRT87PA6NCN2 255 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 SLCO2B1O94956 709 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 APOA4P06727 396 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 AOAHP28039 575 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 CTNNA1P35221 906 aaKnown RBP13.26□□□□□ -0.29
VARS-227ENST00000489979 PTPN7P35236 360 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 BDKRB1P46663 353 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 YBX1P67809 324 aaKnown RBP13.26□□□□□ -0.29
VARS-227ENST00000489979 ZNF33BQ06732 778 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 DSG2Q14126 1118 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 PRTGQ2VWP7 1150 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 CCSMST1Q4G0I0 132 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 ZNF766Q5HY98 468 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 AADACL2Q6P093 401 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 FBXO42Q6P3S6 717 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 TTC23LQ6PF05 361 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 AFTPHQ6ULP2 937 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 NEK10Q6ZWH5 1172 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 KRT222Q8N1A0 295 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 TAB3Q8N5C8 712 aaPredicted RBP13.26□□□□□ -0.29
VARS-227ENST00000489979 FAM71DQ8N9W8 422 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 RAD51AP1Q96B01 352 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 C14orf79Q96F83 325 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 MAGED4Q96JG8 741 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 ZFYVE21Q9BQ24 234 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 ZNF700Q9H0M5 742 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 C14orf105Q9NVL8 296 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 HEATR5BQ9P2D3 2071 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 CDC14AQ9UNH5 594 aa13.26□□□□□ -0.29
VARS-227ENST00000489979 A0A1W2PPV9 198 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 FAM227AF5H4B4 570 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms