RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 HOMER3Q9NSC5 361 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 CUEDC1Q9NWM3 386 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-204ENST00000489898 SERTAD3Q9UJW9 196 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 ADAMTS6Q9UKP5 1117 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 NTNG1Q9Y2I2 539 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 MRPS2Q9Y399 296 aaKnown RBP11.3□□□□□ -0.6
SRSF4-204ENST00000489898 APCP25054 2843 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 TARM1B6A8C7 271 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 AP3B1O00203 1094 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 DNALI1O14645 258 aaPredicted RBP11.29□□□□□ -0.6
SRSF4-204ENST00000489898 FKBP9O95302 570 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 RPN2P04844 631 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 HBQ1P09105 142 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 STEAP4Q687X5 459 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 JMJD6Q6NYC1 403 aaPredicted RBP11.29□□□□□ -0.6
SRSF4-204ENST00000489898 FBXO42Q6P3S6 717 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 ZNF449Q6P9G9 518 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 SUSD1Q6UWL2 747 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 MBOAT1Q6ZNC8 495 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 TTLL10Q6ZVT0 673 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 VN1R4Q7Z5H5 301 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 CREG2Q8IUH2 290 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 CPNE9Q8IYJ1 553 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 GPR135Q8IZ08 494 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 METTL27Q8N6F8 245 aaPredicted RBP11.29□□□□□ -0.6
SRSF4-204ENST00000489898 TMEM102Q8N9M5 508 aaPredicted RBP11.29□□□□□ -0.6
SRSF4-204ENST00000489898 C2CD4AQ8NCU7 369 aaPredicted RBP11.29□□□□□ -0.6
SRSF4-204ENST00000489898 OR9A1PQ8NGU1 263 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 ASB11Q8WXH4 323 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 OR2A5Q96R48 311 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 GPR21Q99679 349 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 AARSD1Q9BTE6 412 aaKnown RBP11.29□□□□□ -0.6
SRSF4-204ENST00000489898 TSSK1BQ9BXA7 367 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 CUTCQ9NTM9 273 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 P4HTMQ9NXG6 502 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 LUZP4Q9P127 313 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 STOX2Q9P2F5 926 aaPredicted RBP11.29□□□□□ -0.6
SRSF4-204ENST00000489898 KLHL42Q9P2K6 505 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 PCYOX1Q9UHG3 505 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 PYCARDQ9ULZ3 195 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 PTRH2Q9Y3E5 179 aaKnown RBP11.29□□□□□ -0.6
SRSF4-204ENST00000489898 MAP4K5Q9Y4K4 846 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 FAM169AQ9Y6X4 670 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 TACC2O95359 2948 aa11.29□□□□□ -0.6
SRSF4-204ENST00000489898 C9J4A7 227 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 H3BMM5 538 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 FOXS1O43638 330 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 HAUS5O94927 633 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 WISP3O95389 354 aaPredicted RBP11.28□□□□□ -0.6
SRSF4-204ENST00000489898 C1QAP02745 245 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 OTX2P32243 289 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 CCNFP41002 786 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 OR1D4P47884 311 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 CCL11P51671 97 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 PGDP52209 483 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 CDKN2DP55273 166 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 DHX9Q08211 1270 aaKnown RBP11.28□□□□□ -0.6
SRSF4-204ENST00000489898 CBLBQ13191 982 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 RAPSNQ13702 412 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 HKDC1Q2TB90 917 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 TRMT10BQ6PF06 316 aaKnown RBP11.28□□□□□ -0.6
SRSF4-204ENST00000489898 KIRREL2Q6UWL6 708 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 IGFL2Q6UWQ7 119 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 IGFL3Q6UXB1 125 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 MED25Q71SY5 747 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 OVCH1Q7RTY7 1134 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 NDNQ99608 321 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 TTC1Q99614 292 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 PLCD4Q9BRC7 762 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 DPH7Q9BTV6 452 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 ACSS2Q9NR19 701 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 ANAPC5Q9UJX4 755 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 FBXO5Q9UKT4 447 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 RUVBL1Q9Y265 456 aaKnown RBP11.28□□□□□ -0.6
SRSF4-204ENST00000489898 DHRS7Q9Y394 339 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 PCDHGB7Q9Y5F8 929 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 SVILO95425 2214 aa11.28□□□□□ -0.6
SRSF4-204ENST00000489898 NCOA6Q14686 2063 aaPredicted RBP11.28□□□□□ -0.6
SRSF4-204ENST00000489898 A0A0J9YVX5 310 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 CTAGE15A4D2H0 777 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 SDR42E2A6NKP2 422 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 E2F3O00716 465 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 HAT1O14929 419 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 KPNA5O15131 536 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 ALBP02768 609 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 MPC1LP0DKB6 136 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 MMP11P24347 488 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 PPARGP37231 505 aaPredicted RBP11.27□□□□□ -0.61
SRSF4-204ENST00000489898 FOLR3P41439 243 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 PNLIPRP1P54315 467 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 VSX2P58304 361 aaPredicted RBP11.27□□□□□ -0.61
SRSF4-204ENST00000489898 SSPNQ14714 243 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 MYBPC3Q14896 1274 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 ARHGAP19Q14CB8 494 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 FASTKD3Q14CZ7 662 aaKnown RBP11.27□□□□□ -0.61
SRSF4-204ENST00000489898 SF1Q15637 639 aaKnown RBP11.27□□□□□ -0.61
SRSF4-204ENST00000489898 PHKG1Q16816 387 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 LONRF1Q17RB8 773 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 HSP90AA5PQ58FG0 334 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 VWA5B1Q5TIE3 1220 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms