RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 ZNF304Q9HCX3 659 aa9.13□□□□□ -0.95
CCT3-213ENST00000489870 SLC22A11Q9NSA0 550 aa9.13□□□□□ -0.95
CCT3-213ENST00000489870 C14orf105Q9NVL8 296 aa9.13□□□□□ -0.95
CCT3-213ENST00000489870 DHCR7Q9UBM7 475 aaKnown RBP9.13□□□□□ -0.95
CCT3-213ENST00000489870 ZNF282Q9UDV7 671 aaPredicted RBP9.13□□□□□ -0.95
CCT3-213ENST00000489870 CACNA1DQ01668 2161 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 KCNE1BA0A087WTH5 132 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 A6NL46 340 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 TCP11X1B4DZS4 312 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 GFYI3L273 518 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 MYO1CO00159 1063 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 HCRTR1O43613 425 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 ZBTB14O43829 449 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 USP1O94782 785 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 VAPBO95292 243 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 HPP00738 406 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 FGGP02679 453 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 MPC1LP0DKB6 136 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 EZRP15311 586 aaKnown RBP9.12□□□□□ -0.95
CCT3-213ENST00000489870 GNLYP22749 145 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 SESN2P58004 480 aaPredicted RBP9.12□□□□□ -0.95
CCT3-213ENST00000489870 BASP1P80723 227 aaKnown RBP9.12□□□□□ -0.95
CCT3-213ENST00000489870 CHAF1BQ13112 559 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 ELOAQ14241 798 aaKnown RBP9.12□□□□□ -0.95
CCT3-213ENST00000489870 SEMA3AQ14563 771 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 TLR1Q15399 786 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 INAQ16352 499 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 PRTGQ2VWP7 1150 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 TUBB8Q3ZCM7 444 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 C4orf17Q53FE4 359 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 ATG9BQ674R7 924 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 UGT3A1Q6NUS8 523 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 NIPAL1Q6NVV3 410 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 NEPROQ6NW34 567 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 FBXO42Q6P3S6 717 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 KIRREL2Q6UWL6 708 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 ISLR2Q6UXK2 745 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 PCGF5Q86SE9 256 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 TRIM73Q86UV7 250 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 CILP2Q8IUL8 1156 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 ST6GALNAC3Q8NDV1 305 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 CFAP61Q8NHU2 1237 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 LPGAT1Q92604 370 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 KCNJ9Q92806 393 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 ZDHHC16Q969W1 377 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 SNRNP40Q96DI7 357 aaKnown RBP9.12□□□□□ -0.95
CCT3-213ENST00000489870 PBKQ96KB5 322 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 WDR77Q9BQA1 342 aaPredicted RBP9.12□□□□□ -0.95
CCT3-213ENST00000489870 DESI2Q9BSY9 194 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 NAT9Q9BTE0 207 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 ILKAPQ9H0C8 392 aaPredicted RBP9.12□□□□□ -0.95
CCT3-213ENST00000489870 KLHL25Q9H0H3 589 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 EPS8L2Q9H6S3 715 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 MKKSQ9NPJ1 570 aaPredicted RBP9.12□□□□□ -0.95
CCT3-213ENST00000489870 PIH1D1Q9NWS0 290 aaKnown RBP9.12□□□□□ -0.95
CCT3-213ENST00000489870 SAMD15Q9P1V8 674 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 PLEKHB1Q9UF11 243 aaPredicted RBP9.12□□□□□ -0.95
CCT3-213ENST00000489870 SLC5A6Q9Y289 635 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 JRKLQ9Y4A0 524 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 HS3ST3B1Q9Y662 390 aa9.12□□□□□ -0.95
CCT3-213ENST00000489870 MYO9AB2RTY4 2548 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 BLACEA4D250 179 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 SOCS6O14544 535 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 CNOT3O75175 753 aaKnown RBP9.11□□□□□ -0.95
CCT3-213ENST00000489870 ZGLP1P0C6A0 271 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 CHRM3P20309 590 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 IL10P22301 178 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 CCND1P24385 295 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 CXCR2P25025 360 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 ARNTP27540 789 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 NMBRP28336 390 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 PER3P56645 1201 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 SNX1Q13596 522 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 KCNJ11Q14654 390 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 NDUFA9Q16795 377 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.11□□□□□ -0.95
CCT3-213ENST00000489870 C1orf189Q5VU69 101 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 NDUFAF7Q7L592 441 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 GAS2L3Q86XJ1 694 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 RASGEF1CQ8N431 466 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 OR11G2Q8NGC1 345 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 STT3BQ8TCJ2 826 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 SKA2Q8WVK7 121 aaPredicted RBP9.11□□□□□ -0.95
CCT3-213ENST00000489870 ASB11Q8WXH4 323 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 HAS2Q92819 552 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 INPP5DQ92835 1189 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 MIEF2Q96C03 454 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 PLCD4Q9BRC7 762 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 DPH7Q9BTV6 452 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 RNF32Q9H0A6 362 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 CCDC68Q9H2F9 335 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 CLK4Q9HAZ1 481 aaKnown RBP9.11□□□□□ -0.95
CCT3-213ENST00000489870 MRPS30Q9NP92 439 aaKnown RBP9.11□□□□□ -0.95
CCT3-213ENST00000489870 MARCH4Q9P2E8 410 aaPredicted RBP9.11□□□□□ -0.95
CCT3-213ENST00000489870 CDC23Q9UJX2 597 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 DHRS7Q9Y394 339 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 PCDHGB6Q9Y5F9 930 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 CELSR2Q9HCU4 2923 aa9.11□□□□□ -0.95
CCT3-213ENST00000489870 LOC102723996A0A087X1L8 192 aa9.1□□□□□ -0.95
CCT3-213ENST00000489870 A0A1W2PPV9 198 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms