RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 FAM47EQ6ZV65 393 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 SMIM29Q86T20 159 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 RTN4RL2Q86UN3 420 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 MMD2Q8IY49 270 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 LSMEM2Q8N112 164 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 OR8H3Q8N146 312 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 MARVELD2Q8N4S9 558 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 CCDC63Q8NA47 563 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 VANGL1Q8TAA9 524 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 TSACCQ96A04 125 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 FAM71F1Q96KD3 344 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 CPVLQ9H3G5 476 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 RNF121Q9H920 327 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 Q9N2K0 584 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 ZNF701Q9NV72 531 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 P4HTMQ9NXG6 502 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 TNNQ9UQP3 1299 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 CHKBQ9Y259 395 aa3.41□□□□□ -1.86
HMGB1P36-201ENST00000487709 FEZF1A0PJY2 475 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 PSMD14O00487 310 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZNF197O14709 1029 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 TBX6O95947 436 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 PAK4O96013 591 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 IGHV4-31P0DP07 118 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 SPP1P10451 314 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 CASTP20810 708 aaKnown RBP3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 HOXC13P31276 330 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 VAMP7P51809 220 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 MTCP1P56278 107 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 SULT2A1Q06520 285 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZNF415Q09FC8 603 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 TRAP1Q12931 704 aaKnown RBP3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 SCARB2Q14108 478 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 TEAD2Q15562 447 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 CDO1Q16878 200 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZNF876PQ49A33 203 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 FGD3Q5JSP0 725 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 CAVIN1Q6NZI2 390 aaKnown RBP3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 CASC4Q6P4E1 433 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 CTR9Q6PD62 1173 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 ANKRD23Q86SG2 305 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 EID3Q8N140 333 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 GPRC5AQ8NFJ5 357 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 CTCFLQ8NI51 663 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 SEPT1Q8WYJ6 367 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 DYRK2Q92630 601 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 FAM20AQ96MK3 541 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 KATNB1Q9BVA0 655 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 P2RY12Q9H244 342 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 FZD8Q9H461 694 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 SIX2Q9NPC8 291 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 SLC52A3Q9NQ40 469 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 PDRG1Q9NUG6 133 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 PKD2L2Q9NZM6 624 aa3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 NOL7Q9UMY1 257 aaKnown RBP3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 GREB1LQ9C091 1923 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 SOS1Q07889 1333 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P36-201ENST00000487709 IFIT3O14879 490 aaKnown RBP3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 GLRA3O75311 464 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 TRMUO75648 421 aaKnown RBP3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 CDC123O75794 336 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 SIX3O95343 332 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 APOHP02749 345 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 GBAP04062 536 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 STAG3L1P0CL83 205 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 RNF224P0DH78 156 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 CYP11B2P19099 503 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 NR1D1P20393 614 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 ALDH4A1P30038 563 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 SFTPDP35247 375 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 PRKCIP41743 596 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 ROR1Q01973 937 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 CACNG1Q06432 222 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 SGCGQ13326 291 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 OPCMLQ14982 345 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 UGP2Q16851 508 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 PHLDA2Q53GA4 152 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZNF790Q6PG37 636 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 TRAT1Q6PIZ9 186 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 SLC16A9Q7RTY1 509 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 SPATA19Q7Z5L4 167 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 NRARPQ7Z6K4 114 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 SIX6OS1Q8N1H7 587 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZNF248Q8NDW4 579 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 AFAP1L1Q8TED9 768 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 FCAMRQ8WWV6 532 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 METTL21AQ8WXB1 218 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 PYCR2Q96C36 320 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 SPATA33Q96N06 139 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 NACAP1Q9BZK3 213 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 FAM129AQ9BZQ8 928 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 PELI2Q9HAT8 420 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 ARGLU1Q9NWB6 273 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 SLC12A6Q9UHW9 1150 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 ITGA11Q9UKX5 1188 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 WDR83OSQ9Y284 106 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 RIPK3Q9Y572 518 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 IGSF1Q8N6C5 1336 aa3.39□□□□□ -1.87
HMGB1P36-201ENST00000487709 HHLA1C9JL84 531 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms