RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 OCMP0CE72 109 aaPredicted RBP11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ARSFP54793 590 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 RPS7P62081 194 aaKnown RBP11.49□□□□□ -0.57
TRA2B-214ENST00000487615 GPM6BQ13491 265 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 TUBB3Q13509 450 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 LIPJQ5W064 366 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 CPXM2Q8N436 756 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 KRTCAP2Q8N6L1 136 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 PIK3C3Q8NEB9 887 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 AURKBQ96GD4 344 aaPredicted RBP11.49□□□□□ -0.57
TRA2B-214ENST00000487615 GPR78Q96P69 363 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 RAD9AQ99638 391 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 TPT1P8Q9HAU6 139 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 SEMA3GQ9NS98 782 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ZDHHC7Q9NXF8 308 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ATXN10Q9UBB4 475 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 LHX3Q9UBR4 397 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 A0A1W2PRB8 838 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 URADA6NGE7 173 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 VEGFBP49765 207 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 CDH12P55289 794 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 OR4D2P58180 307 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ITGADQ13349 1161 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 AFMIDQ63HM1 303 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 OR2T5Q6IEZ7 315 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 VITQ6UXI7 678 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ZNF655Q8N720 491 aaPredicted RBP11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ANKFN1Q8N957 763 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 OR2T29Q8NH02 315 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 GATA6Q92908 595 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 FBXL20Q96IG2 436 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 FNDC11Q9BVV2 318 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 SLC2A11Q9BYW1 496 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 RHBGQ9H310 441 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 SLC28A3Q9HAS3 691 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 PLAC1Q9HBJ0 212 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 CMTM6Q9NX76 183 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ELOVL2Q9NXB9 296 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 FADS2O95864 444 aaKnown RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 HLA-EP13747 358 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 BUD31P41223 144 aaPredicted RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 DEFB103AP81534 67 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 RCAN2Q14206 197 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 MBTPS1Q14703 1052 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 ATG9BQ674R7 924 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 HTR3DQ70Z44 454 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 FAM124AQ86V42 546 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 MFSD6LQ8IWD5 586 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 PYURFQ96I23 114 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 PNMA8CA0A1B0GUJ8 204 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 A6NHS1 94 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 PRMT3O60678 531 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 CLIC3O95833 236 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 EIF2S1P05198 315 aaKnown RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 SRPRAP08240 638 aaKnown RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 PABPC4LP0CB38 370 aaKnown RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 HOXC8P31273 242 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 YAP1P46937 504 aaKnown RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 MRPL58Q14197 206 aaKnown RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 ZBED5Q49AG3 693 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 C9orf64Q5T6V5 341 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 ADGRG2Q8IZP9 1017 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 SORCS1Q8WY21 1168 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 RHBDF1Q96CC6 855 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 EPB41L1Q9H4G0 881 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 C3orf14Q9HBI5 128 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 DDX28Q9NUL7 540 aaKnown RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 ZNF780BQ9Y6R6 833 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 H3BSA7 217 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 MMP2P08253 660 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 ALDOCP09972 364 aaKnown RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 PFKLP17858 780 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 HSD17B2P37059 387 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 MAPK11Q15759 364 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 TRIM71Q2Q1W2 868 aaKnown RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 SPANXN2Q5MJ10 180 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 RSPO2Q6UXX9 243 aaPredicted RBP11.48□□□□□ -0.57
TRA2B-214ENST00000487615 ZNF438Q7Z4V0 828 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 TRIM74Q86UV6 250 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 PARP8Q8N3A8 854 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 SLC43A3Q8NBI5 491 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 CHST14Q8NCH0 376 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 LINC01599Q8WXQ3 324 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 BORCS5Q969J3 196 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 MYRFLQ96LU7 910 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 C12orf66Q96MD2 445 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 TOX2Q96NM4 488 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 TMEM45AQ9NWC5 275 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 GPR45Q9Y5Y3 372 aa11.48□□□□□ -0.57
TRA2B-214ENST00000487615 A0A096LPI6 279 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 C8BP07358 591 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 C7P10643 843 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 CTSEP14091 401 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 PTX3P26022 381 aaPredicted RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 DNAJA1P31689 397 aaKnown RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 ERVK-21P61565 698 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 SKP1P63208 163 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 HSPB3Q12988 150 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 NR1D2Q14995 579 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 TJAP1Q5JTD0 557 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms