RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TRPC4Q9UBN4 977 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 C19orf25Q9UFG5 118 aaPredicted RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 ZC3H7BQ9UGR2 993 aaKnown RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 ST6GALNAC2Q9UJ37 374 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 TRHDEQ9UKU6 1024 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 KLHL20Q9Y2M5 609 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 RTTNQ86VV8 2226 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 LOC102723996A0A087X1L8 192 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 FAM237BA0A1B0GVD1 139 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 NKX2-6A6NCS4 301 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 A8MUI8 341 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 FAM171A2A8MVW0 826 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 EIF2S1P05198 315 aaKnown RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 TPOP07202 933 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 CYC1P08574 325 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 HOXD4P09016 255 aaPredicted RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 H2AFZP0C0S5 128 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 OR56A5P0C7T3 313 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 C8orf89P0DMQ9 161 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 ADSLP30566 484 aaPredicted RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 GRIA3P42263 894 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 ARHGAP25P42331 645 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 MEOX1P50221 254 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 ZNF140P52738 457 aaPredicted RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 WASHC5Q12768 1159 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 TUBA3CQ13748 450 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 TFDP2Q14188 446 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 PRPSAP1Q14558 356 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 ITIH4Q14624 930 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 BRD3Q15059 726 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 OR1C1Q15619 314 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 STX1AQ16623 288 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 TAZQ16635 292 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 BTBD16Q32M84 506 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 DNAJC21Q5F1R6 531 aaKnown RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 ALKBH5Q6P6C2 394 aaKnown RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 TUBA3EQ6PEY2 450 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 TTC23LQ6PF05 361 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 SASS6Q6UVJ0 657 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 C3P1Q6ZMU1 363 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 CEP128Q6ZU80 1094 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 H2AFVQ71UI9 128 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 TAS2R42Q7RTR8 314 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 GALNTL5Q7Z4T8 443 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 DCUN1D3Q8IWE4 304 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 ZNF567Q8N184 647 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 BEST3Q8N1M1 668 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 CLDN19Q8N6F1 224 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 MDS2Q8NDY4 140 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 OR2L8Q8NGY9 312 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 NRGNQ92686 78 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 RND1Q92730 232 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 P3H4Q92791 437 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 PPP1R2P1Q96PQ5 205 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 TRIM51Q9BSJ1 452 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 TSSK1BQ9BXA7 367 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 POLDIP3Q9BY77 421 aaKnown RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 TGIF2Q9GZN2 237 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 TP63Q9H3D4 680 aaPredicted RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 RTN4Q9NQC3 1192 aaKnown RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 NPDC1Q9NQX5 325 aaPredicted RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 DLL4Q9NR61 685 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 DDX56Q9NY93 547 aaKnown RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 SLC39A10Q9ULF5 831 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 RPH3AQ9Y2J0 694 aaPredicted RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 AAR2Q9Y312 384 aaKnown RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 LUC7L2Q9Y383 392 aaKnown RBP7.26□□□□□ -1.25
PDPN-205ENST00000487038 MRFAP1Q9Y605 127 aa7.26□□□□□ -1.25
PDPN-205ENST00000487038 TRBV5-4A0A0C4DH59 114 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 A0A0J9YVX5 310 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 USP27XA6NNY8 438 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 H7C0S8 307 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 CDK2AP1O14519 115 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 PHF2O75151 1096 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 AGTP01019 485 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 SERPING1P05155 500 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 TPBGLP0DKB5 382 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 PTGS2P35354 604 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 PEX19P40855 299 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 DGKQP52824 942 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 EMP3P54852 163 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 TAS2R50P59544 299 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 HSF1Q00613 529 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 OC90Q02509 493 aaPredicted RBP7.25□□□□□ -1.25
PDPN-205ENST00000487038 TFF3Q07654 80 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 MESDQ14696 234 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 FIGNQ5HY92 759 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 ACER2Q5QJU3 275 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 PLAG1Q6DJT9 500 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 TMEM205Q6UW68 189 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 UNC5DQ6UXZ4 953 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 RNF44Q7L0R7 432 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 CAMKMTQ7Z624 323 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 CD163Q86VB7 1156 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 LAPTM4BQ86VI4 370 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 CPNE8Q86YQ8 564 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 SIAH3Q8IW03 269 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 DTWD1Q8N5C7 304 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 SLC5A8Q8N695 610 aa7.25□□□□□ -1.25
PDPN-205ENST00000487038 LINC01555Q8NAE3 123 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms