RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CDH4P55283 916 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 TMPRSS3P57727 454 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 TAS2R38P59533 333 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 ERVPABLB-1P60509 514 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 PITX1P78337 314 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 CCDC173Q0VFZ6 552 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 ZNF177Q13360 481 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 TAF5Q15542 800 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 ZNF284Q2VY69 593 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 CCDC40Q4G0X9 1142 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 TAF1BQ53T94 588 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 EFHC1Q5JVL4 640 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 PIP5KL1Q5T9C9 394 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 ABLIM2Q6H8Q1 611 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 CXorf57Q6NSI4 855 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 FBXL22Q6P050 247 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 DENND1BQ6P3S1 775 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 KDM7AQ6ZMT4 941 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 RRAGAQ7L523 313 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 ENOSF1Q7L5Y1 443 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 ABI3BPQ7Z7G0 1075 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 HORMAD1Q86X24 394 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 DEFB106AQ8N104 65 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 AKAP1Q92667 903 aaKnown RBP eCLIP3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 SMARCE1Q969G3 411 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 FAM81BQ96LP2 452 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 APOLD1Q96LR9 279 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 CCDC114Q96M63 670 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 TIGD1Q96MW7 591 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 RPRD1AQ96P16 312 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 LGMNQ99538 433 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 TMEM204Q9BSN7 226 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 ABCG4Q9H172 646 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 SLC25A32Q9H2D1 315 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 AAMDCQ9H7C9 122 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 POLR1BQ9H9Y6 1135 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 TMEM51Q9NW97 253 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 NLGN3Q9NZ94 848 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 NCKIPSDQ9NZQ3 722 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 HOOK1Q9UJC3 728 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 VPS28Q9UK41 221 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 UTS2RQ9UKP6 389 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 HS3ST2Q9Y278 367 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 CA5BQ9Y2D0 317 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 CSNK1G3Q9Y6M4 447 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 PTPN13Q12923 2485 aa3.99□□□□□ -1.77
SNRNP40-205ENST00000486941 COL27A1Q8IZC6 1860 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 ATMQ13315 3056 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 HECTD1Q9ULT8 2610 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 SPTY2D1-AS1A0A0U1RR47 76 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 BICDL2A1A5D9 508 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 GOLGA6L4A6NEF3 574 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 KPNA3O00505 521 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 TPP1O14773 563 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 FFAR2O15552 330 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 THAP12O43422 761 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 HSF2BPO75031 334 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 USP12O75317 370 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 CSO75390 466 aaKnown RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 LETM1O95202 739 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 GNA14O95837 355 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 F9P00740 461 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 AFPP02771 609 aaKnown RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 CSF2P04141 144 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 CTSLP07711 333 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 SRCP12931 536 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 KRT5P13647 590 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 PRLRP16471 622 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 TFEBP19484 476 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 EPHB1P54762 984 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 SNX16P57768 344 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 HNRNPKP61978 463 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 RPS21P63220 83 aaKnown RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 KRT83P78385 493 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 SLC20A2Q08357 652 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 PDCLQ13371 301 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 FZD2Q14332 565 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 POLD3Q15054 466 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 ASIC2Q16515 512 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 ISXQ2M1V0 245 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 POM121L1PQ3SYA9 428 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 TTI2Q6NXR4 508 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 MZT2AQ6P582 158 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 GCNT7Q6ZNI0 430 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 Q6ZSR6 202 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 C11orf57Q6ZUT1 292 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 ERN2Q76MJ5 926 aaKnown RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 TRILQ7L0X0 811 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 CHST15Q7LFX5 561 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 SETD3Q86TU7 594 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 ZSCAN30Q86W11 494 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 WDTC1Q8N5D0 677 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 ZNF397Q8NF99 534 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 OR52K2Q8NGK3 314 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 OR2A12Q8NGT7 310 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 MAPK15Q8TD08 544 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 NUDCD2Q8WVJ2 157 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 KCNE4Q8WWG9 221 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 ASB12Q8WXK4 309 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 KLK6Q92876 244 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms