RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SRSF11Q05519 484 aaKnown RBP12.86□□□□□ -0.35
HMGN1-216ENST00000486741 LRRC26Q2I0M4 334 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 PDCD4Q53EL6 469 aaKnown RBP12.86□□□□□ -0.35
HMGN1-216ENST00000486741 NOXRED1Q6NXP6 359 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 SMYD1Q8NB12 490 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 GTPBP3Q969Y2 492 aaKnown RBP12.86□□□□□ -0.35
HMGN1-216ENST00000486741 KXD1Q9BQD3 176 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 C6orf62Q9GZU0 229 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-216ENST00000486741 XKR8Q9H6D3 395 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 FANCEQ9HB96 536 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 ERN1O75460 977 aaKnown RBP12.86□□□□□ -0.35
HMGN1-216ENST00000486741 GSRP00390 522 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 FABP3P05413 133 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 RPS17P08708 135 aaKnown RBP12.86□□□□□ -0.35
HMGN1-216ENST00000486741 HOXC8P31273 242 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 ERVK-21P61565 698 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 GK3PQ14409 553 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 PCBP2Q15366 365 aaKnown RBP eCLIP12.86□□□□□ -0.35
HMGN1-216ENST00000486741 TYSND1Q2T9J0 566 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 GALNT13Q8IUC8 556 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 EGLN2Q96KS0 407 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 DPH2Q9BQC3 489 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-216ENST00000486741 FZD4Q9ULV1 537 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 ANGPT4Q9Y264 503 aa12.86□□□□□ -0.35
HMGN1-216ENST00000486741 PI15O43692 258 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 CREG1O75629 220 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 FADS2O95864 444 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 SLC16A8O95907 504 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 FGF4P08620 206 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 IDSP22304 550 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 RPS7P62081 194 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 DOC2AQ14183 400 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ATAD3BQ5T9A4 648 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 CASP12Q6UXS9 341 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 MIR1-1HGQ9H1L0 117 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 SOCS2O14508 198 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 KRT75O95678 551 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 TGM3Q08188 693 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 EPS8Q12929 822 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 LRP8Q14114 963 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 GANABQ14697 944 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 TYW3Q6IPR3 259 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 KCTD8Q6ZWB6 473 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 PIK3C3Q8NEB9 887 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 RHBDF1Q96CC6 855 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 RBM4BQ9BQ04 359 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 RBM4Q9BWF3 364 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 SPACA6W5XKT8 324 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ABLIM3O94929 683 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ENO2P09104 434 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 CDH1P12830 882 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 OXTRP30559 389 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ST13P50502 369 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 TAS2R50P59544 299 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 GALNT1Q10472 559 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ZC3H12BQ5HYM0 836 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 PGM2L1Q6PCE3 622 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 PARGQ86W56 976 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ZCCHC10Q8TBK6 192 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 FAM110BQ8TC76 370 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ISL2Q96A47 359 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 BIRC8Q96P09 236 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 NDEL1Q9GZM8 345 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 MUC13Q9H3R2 512 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 NDRG2Q9UN36 371 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 DMTF1Q9Y222 760 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 GLOD5A6NK44 160 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ZNF195O14628 629 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ZW10O43264 779 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 TRMUO75648 421 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ANGPTL1O95841 491 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 PEX11BO96011 259 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 CBSLP0DN79 551 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 MTHFD2P13995 350 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 IL7RP16871 459 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ZNF8P17098 575 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 HTR1BP28222 390 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 CBSP35520 551 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ANXA11P50995 505 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ATP4BP51164 291 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 DAG1Q14118 895 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 TRIM16LQ309B1 348 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 PRAMEF14Q5SWL7 426 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 PRAMEF13Q5VWM6 474 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 AHSA2Q719I0 299 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 PATL1Q86TB9 770 aaKnown RBP12.85□□□□□ -0.35
HMGN1-216ENST00000486741 APIPQ96GX9 242 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 CWH43Q9H720 699 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 WDR26Q9H7D7 661 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 TPT1P8Q9HAU6 139 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 DNAJB9Q9UBS3 223 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 ASB1Q9Y576 335 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 PAPPA2Q9BXP8 1791 aa12.85□□□□□ -0.35
HMGN1-216ENST00000486741 PNMA8CA0A1B0GUJ8 204 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 HEPACAM2A8MVW5 462 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 H7BY64 318 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 TNFRSF11BO00300 401 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 RTCAO00442 366 aaKnown RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 ALPPL2P10696 532 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 CEBPBP17676 345 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms