RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 RPF2Q9H7B2 306 aaKnown RBP19.72■□□□□ 0.75
HPS3-206ENST00000486530 SGK2Q9HBY8 427 aa19.72■□□□□ 0.75
HPS3-206ENST00000486530 LMCD1Q9NZU5 365 aa19.72■□□□□ 0.75
HPS3-206ENST00000486530 USP22Q9UPT9 525 aa19.72■□□□□ 0.75
HPS3-206ENST00000486530 ANTXRLA6NF34 631 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 TACR1P25103 407 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 CHN2P52757 468 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 TBPL1P62380 186 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 DPY19L1Q2PZI1 675 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 LRIF1Q5T3J3 769 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 GLYATQ6IB77 296 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 OR52E8Q6IFG1 317 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 CAPRIN2Q6IMN6 1127 aaKnown RBP19.71■□□□□ 0.75
HPS3-206ENST00000486530 RIMKLAQ8IXN7 391 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 OR9A1PQ8NGU1 263 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 ERLEC1Q96DZ1 483 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 ITCHQ96J02 903 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 CIB1Q99828 191 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 RSPH9Q9H1X1 276 aaPredicted RBP19.71■□□□□ 0.75
HPS3-206ENST00000486530 PIF1Q9H611 641 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 ITM2CQ9NQX7 267 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 TRPM6Q9BX84 2022 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 A0A096LPI6 279 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 TRBV5-3A0A0A0MS03 114 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 PRMT3O60678 531 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 ADH1BP00325 375 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 ZCCHC18P0CG32 403 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 GGT1P19440 569 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 MAP7Q14244 749 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 CST6Q15828 149 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 RUNDC3AQ59EK9 446 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 AGBL4Q5VU57 503 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 PNCKQ6P2M8 343 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 UGT2A3Q6UWM9 527 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 UNC5DQ6UXZ4 953 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 MSRB3Q8IXL7 192 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 SYTL1Q8IYJ3 562 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 TBC1D21Q8IYX1 336 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 CHPFQ8IZ52 775 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 DTWD1Q8N5C7 304 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 PACRGLQ8N7B6 248 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 PLA2G15Q8NCC3 412 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 OR2T12Q8NG77 320 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 ZNF583Q96ND8 569 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 HHIPQ96QV1 700 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 CLDND1Q9NY35 253 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 SLC25A37Q9NYZ2 338 aa19.71■□□□□ 0.75
HPS3-206ENST00000486530 RUVBL1Q9Y265 456 aaKnown RBP19.71■□□□□ 0.75
HPS3-206ENST00000486530 MID1O15344 667 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 GMNNO75496 209 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 PRPS1L1P21108 318 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 ACADLP28330 430 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 SOX11P35716 441 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 HNRNPFP52597 415 aaKnown RBP19.7■□□□□ 0.74
HPS3-206ENST00000486530 RPA4Q13156 261 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 CAMK2GQ13555 558 aaPredicted RBP19.7■□□□□ 0.74
HPS3-206ENST00000486530 NFE2L1Q14494 772 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 NRF1Q16656 503 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 INTS11Q5TA45 600 aaKnown RBP19.7■□□□□ 0.74
HPS3-206ENST00000486530 DNAJC14Q6Y2X3 702 aaPredicted RBP19.7■□□□□ 0.74
HPS3-206ENST00000486530 ZBTB49Q6ZSB9 765 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 C11orf96Q7Z7L8 435 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 HEATR4Q86WZ0 1026 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 RNF175Q8N4F7 328 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 BIRC7Q96CA5 298 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 REPS1Q96D71 796 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 CENPNQ96H22 339 aaPredicted RBP19.7■□□□□ 0.74
HPS3-206ENST00000486530 MSLNLQ96KJ4 702 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 MYCBPQ99417 103 aaPredicted RBP19.7■□□□□ 0.74
HPS3-206ENST00000486530 MTERF1Q99551 399 aaKnown RBP19.7■□□□□ 0.74
HPS3-206ENST00000486530 THUMPD3Q9BV44 507 aaKnown RBP19.7■□□□□ 0.74
HPS3-206ENST00000486530 SGPP1Q9BX95 441 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 PAIP1Q9H074 479 aaKnown RBP19.7■□□□□ 0.74
HPS3-206ENST00000486530 PPT2Q9UMR5 302 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 DYRK1BQ9Y463 629 aa19.7■□□□□ 0.74
HPS3-206ENST00000486530 PCM1Q15154 2024 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 PCCBP05166 539 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 ANXA6P08133 673 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 MTHFRP42898 656 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 RGS19P49795 217 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 POLE2P56282 527 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 PHC1P78364 1004 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 DDX39BQ13838 428 aaKnown RBP19.69■□□□□ 0.74
HPS3-206ENST00000486530 C10orf62Q5T681 223 aaPredicted RBP19.69■□□□□ 0.74
HPS3-206ENST00000486530 PPP4R4Q6NUP7 873 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 SLCO4C1Q6ZQN7 724 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 GPR180Q86V85 440 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 SYT12Q8IV01 421 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 ST13P4Q8IZP2 240 aaPredicted RBP19.69■□□□□ 0.74
HPS3-206ENST00000486530 TMEM132CQ8N3T6 1108 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 NEIL2Q969S2 332 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 MIEF2Q96C03 454 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 WDR34Q96EX3 536 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 TRMT61BQ9BVS5 477 aaKnown RBP19.69■□□□□ 0.74
HPS3-206ENST00000486530 OSBPL11Q9BXB4 747 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 SERHLQ9NQF3 203 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 IGLON5A6NGN9 336 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 TPST1O60507 370 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 MYO1DO94832 1006 aa19.69■□□□□ 0.74
HPS3-206ENST00000486530 CDH1P12830 882 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms