RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 TCEAL6Q6IPX3 200 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 IRGCQ6NXR0 463 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 CYB5D1Q6P9G0 228 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 SH2D5Q6ZV89 423 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 EFL1Q7Z2Z2 1120 aaKnown RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 MILR1Q7Z6M3 343 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 THOC6Q86W42 341 aaKnown RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 C17orf64Q86WR6 236 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 CRLF3Q8IUI8 442 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 NAXDQ8IW45 347 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 WDR75Q8IWA0 830 aaKnown RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 SLC25A45Q8N413 288 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 Q8N9G6 341 aaPredicted RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 FAM181AQ8N9Y4 354 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 KYQ8NBH2 561 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 GPR156Q8NFN8 814 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 MDM1Q8TC05 714 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 ZNF480Q8WV37 535 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 NCSTNQ92542 709 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 TCEAL3Q969E4 200 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 UBE2E3Q969T4 207 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 RHBDF1Q96CC6 855 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 REPS1Q96D71 796 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 GPR78Q96P69 363 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 DPYSL5Q9BPU6 564 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 PITPNM3Q9BZ71 974 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 ILKAPQ9H0C8 392 aaPredicted RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 XKR8Q9H6D3 395 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 IPPKQ9H8X2 491 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 ACTR8Q9H981 624 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 MRPS30Q9NP92 439 aaKnown RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 SEMA4BQ9NPR2 832 aaPredicted RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 GPRC5BQ9NZH0 403 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 SCHIP1Q9P0W5 487 aaPredicted RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 ZNF624Q9P2J8 865 aaPredicted RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 CIDEBQ9UHD4 219 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 PTBP2Q9UKA9 531 aaKnown RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 PLAGL1Q9UM63 463 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 RAXQ9Y2V3 346 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 DOCK9Q9BZ29 2069 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 TP53BP1Q12888 1972 aaPredicted RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 NUMA1Q14980 2115 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 A6NCN8 305 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 PRR19A6NJB7 356 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 C4orf47A7E2U8 309 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 E7ENX8 843 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 SLCO1B7G3V0H7 640 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 G3V2L1 256 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 KLK8O60259 260 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 NOBOXO60393 691 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 NPHS1O60500 1241 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 CLDN9O95484 217 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 CHRM5P08912 532 aaPredicted RBP6.72□□□□□ -1.33
UBR4-214ENST00000486515 TROVE2P10155 538 aaKnown RBP eCLIP6.72□□□□□ -1.33
UBR4-214ENST00000486515 CDK4P11802 303 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 PNLIPP16233 465 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 CKMT2P17540 419 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 BGNP21810 368 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 IMPA1P29218 277 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 HMOX2P30519 316 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 PKLRP30613 574 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 GGT5P36269 586 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 GMPRP36959 345 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 MDH1P40925 334 aaKnown RBP6.72□□□□□ -1.33
UBR4-214ENST00000486515 ETV4P43268 484 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 SLC1A6P48664 564 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 CCR8P51685 355 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 HK2P52789 917 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 PKNOX1P55347 436 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 ABCE1P61221 599 aaKnown RBP6.72□□□□□ -1.33
UBR4-214ENST00000486515 TBPL1P62380 186 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 UBE2IP63279 158 aaKnown RBP6.72□□□□□ -1.33
UBR4-214ENST00000486515 TAP2Q03519 686 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 CLCQ05315 142 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 LCP2Q13094 533 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 IFT88Q13099 833 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 GTF2H2Q13888 395 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 RCN2Q14257 317 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 PCLAFQ15004 111 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 XKR6Q5GH73 641 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 ZNF678Q5SXM1 525 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 TMTC4Q5T4D3 741 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 GTF2H2CQ6P1K8 395 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 SUSD1Q6UWL2 747 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 MBOAT1Q6ZNC8 495 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 GOLGA7Q7Z5G4 137 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 CPLX4Q7Z7G2 160 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 SLC35F3Q8IY50 421 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 C2orf73Q8N5S3 287 aaPredicted RBP6.72□□□□□ -1.33
UBR4-214ENST00000486515 ZNF655Q8N720 491 aaPredicted RBP6.72□□□□□ -1.33
UBR4-214ENST00000486515 PPFIBP2Q8ND30 876 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 LSM14AQ8ND56 463 aaKnown RBP6.72□□□□□ -1.33
UBR4-214ENST00000486515 OR2I1PQ8NGU4 316 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 HMGCLL1Q8TB92 370 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 IFI44Q8TCB0 444 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 DENND1AQ8TEH3 1009 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 TRPC4APQ8TEL6 797 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 PATE1Q8WXA2 126 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 DLG3Q92796 817 aa6.72□□□□□ -1.33
UBR4-214ENST00000486515 ESAMQ96AP7 390 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms