RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 EMCNQ9ULC0 261 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 SLC39A10Q9ULF5 831 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 WDR91A4D1P6 747 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 OR5K4A6NMS3 321 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 H7C0S8 307 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 HNRNPCL1O60812 293 aaKnown RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 KATNA1O75449 491 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 POP7O75817 140 aaKnown RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 RASSF9O75901 435 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 DNAJB5O75953 348 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 S1PR4O95977 384 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 FOLR1P15328 257 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 TCN2P20062 427 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 CD9P21926 228 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 GABRB3P28472 473 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 SERPINB5P36952 375 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 PPARGP37231 505 aaPredicted RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 ZNF140P52738 457 aaPredicted RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 RPS18P62269 152 aaKnown RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 OCRLQ01968 901 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 ABHD18Q0P651 414 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 CHI3L2Q15782 390 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 RPE65Q16518 533 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 TYSND1Q2T9J0 566 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 AARS2Q5JTZ9 985 aaKnown RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 PRAMEF17Q5VTA0 474 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 AGAP9Q5VTM2 703 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 CACHD1Q5VU97 1274 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 KLC3Q6P597 504 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 TMEM220Q6QAJ8 160 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 TBC1D1Q86TI0 1168 aaPredicted RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 PLXDC1Q8IUK5 500 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 TRIM48Q8IWZ4 208 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 OR6P1Q8NGX9 317 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 OR4L1Q8NH43 312 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 BLOC1S5Q8TDH9 187 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 PPP4R1Q8TF05 950 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 C10orf82Q8WW14 230 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 STON2Q8WXE9 905 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 HDAC10Q969S8 669 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 LRRC37BQ96QE4 947 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 TEFMQ96QE5 360 aaKnown RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 TIMM29Q9BSF4 260 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 ZNF768Q9H5H4 540 aaKnown RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 SLCO1B3Q9NPD5 702 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 CATSPERZQ9NTU4 200 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 IL1RAPL1Q9NZN1 696 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 IL17CQ9P0M4 197 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 SLC17A6Q9P2U8 582 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 NFKBIL1Q9UBC1 381 aaPredicted RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 VWA7Q9Y334 891 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 COMMD10Q9Y6G5 202 aa9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 UBR5O95071 2799 aaPredicted RBP9.11□□□□□ -0.95
TMEM39A-208ENST00000486159 NOTCH2Q04721 2471 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 CCL22O00626 93 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 CD3EAPO15446 510 aaKnown RBP9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 SGTAO43765 313 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 TRIM13O60858 407 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 KLHL2O95198 593 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 RBP1P09455 135 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 ANKRD34CP0C6C1 535 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 EBLN1P0CF75 366 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 SLC35E2BP0CK96 405 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 MYL2P10916 166 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 RALBP11234 206 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 SFTPCP11686 197 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 IDSP22304 550 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 HMGCLP35914 325 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 CAPZBP47756 277 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 ARFIP2P53365 341 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 NAA20P61599 178 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 MPP1Q00013 466 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 ACTN3Q08043 901 aaPredicted RBP9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 BST1Q10588 318 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 CTBP1Q13363 440 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 PCLAFQ15004 111 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 FAM83EQ2M2I3 478 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 GALNTL6Q49A17 601 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 GPRC6AQ5T6X5 926 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 LCN10Q6JVE6 187 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 PWWP2BQ6NUJ5 590 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 C6orf15Q6UXA7 325 aaPredicted RBP9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 ZYG11AQ6WRX3 759 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 GLT6D1Q7Z4J2 308 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 CMC1Q7Z7K0 106 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 RASGRP3Q8IV61 690 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 WDR75Q8IWA0 830 aaKnown RBP9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 DENND6AQ8IWF6 608 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 OR6Y1Q8NGX8 325 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 C9orf43Q8TAL5 461 aaPredicted RBP9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 CT55Q8WUE5 264 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 KLHL6Q8WZ60 621 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.1□□□□□ -0.951e-7■■■■■ 35.3
TMEM39A-208ENST00000486159 CXorf40BQ96DE9 158 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 CDKN2AIPNLQ96HQ2 116 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 VPS35Q96QK1 796 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 INSM2Q96T92 566 aaPredicted RBP9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 MAP3K3Q99759 626 aa9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 MRPL57Q9BQC6 102 aaKnown RBP9.1□□□□□ -0.95
TMEM39A-208ENST00000486159 WWP1Q9H0M0 922 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms