RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 GNAZP19086 355 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 TFEBP19484 476 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 CXCR2P25025 360 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ITPKBP27987 946 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 HPDP32754 393 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SLCO1A2P46721 670 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SEPHS1P49903 392 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 GFERP55789 205 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 NAA20P61599 178 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 TAP2Q03519 686 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 CFHR1Q03591 330 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 C19orf57Q0VDD7 668 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ASPHQ12797 758 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 NAE1Q13564 534 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 TGFBIQ15582 683 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 TSNQ15631 228 aaKnown RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 HIST2H2ACQ16777 129 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 C3orf38Q5JPI3 329 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 TCTE1Q5JU00 501 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 PRAMEF13Q5VWM6 474 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 HIST2H2AA3Q6FI13 130 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 TLDC1Q6P9B6 456 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SBSNQ6UWP8 590 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 TMEM207Q6UWW9 146 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 LRIG3Q6UXM1 1119 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 LRRC69Q6ZNQ3 347 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ADCK2Q7Z695 626 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 B3GNT8Q7Z7M8 397 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ISCA2Q86U28 154 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 PPP1R3BQ86XI6 285 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 RASGRP3Q8IV61 690 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 D2HGDHQ8N465 521 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 C2orf73Q8N5S3 287 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ZNF655Q8N720 491 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 GOLGA6L1Q8N7Z2 621 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 C19orf47Q8N9M1 422 aaKnown RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 RCBTB1Q8NDN9 531 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 MYRIPQ8NFW9 859 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ANKRD49Q8WVL7 239 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 RERGQ96A58 199 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ALKBH8Q96BT7 664 aaKnown RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 NXNL1Q96CM4 212 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 THAP11Q96EK4 314 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SLC46A1Q96NT5 459 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 IL17FQ96PD4 163 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 TRAPPC9Q96Q05 1148 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SMC6Q96SB8 1091 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 PITHD1Q9GZP4 211 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 MRPL46Q9H2W6 279 aaKnown RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ACBD3Q9H3P7 528 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 PRM3Q9NNZ6 103 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 IGSF5Q9NSI5 407 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 TMEM184CQ9NVA4 438 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 IRAK4Q9NWZ3 460 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 WWOXQ9NZC7 414 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 STOX2Q9P2F5 926 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 PISDQ9UG56 409 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ADAMTS6Q9UKP5 1117 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 GRID1Q9ULK0 1009 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 PLCL2Q9UPR0 1127 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SATB2Q9UPW6 733 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 PLAAQ9Y263 795 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 BTRCQ9Y297 605 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ANGPTL3Q9Y5C1 460 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 PCDHGA7Q9Y5G6 932 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 PCDHGA3Q9Y5H0 932 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 AP1M2Q9Y6Q5 423 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 NAV2Q8IVL1 2488 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 APC2O95996 2303 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 HMX2A2RU54 273 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 COPEO14579 308 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 CLGNO14967 610 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 RRP8O43159 456 aaKnown RBP7.96□□□□□ -1.14
SF3A1-208ENST00000485618 CTIFO43310 598 aaKnown RBP7.96□□□□□ -1.14
SF3A1-208ENST00000485618 KIF1CO43896 1103 aaKnown RBP7.96□□□□□ -1.14
SF3A1-208ENST00000485618 GLRA3O75311 464 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 KATNA1O75449 491 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 RFPL1O75677 317 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 STK16O75716 305 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 WISP3O95389 354 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-208ENST00000485618 SHBGP04278 402 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 CD63P08962 238 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 PYGBP11216 843 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 IMPA1P29218 277 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 GGT5P36269 586 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 MAGEA12P43365 314 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 CCR8P51685 355 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 MAPK10P53779 464 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 ALDH18A1P54886 795 aaKnown RBP7.96□□□□□ -1.14
SF3A1-208ENST00000485618 TUBB3Q13509 450 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 LAPTM5Q13571 262 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 GRB7Q14451 532 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 C16orf72Q14CZ0 275 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 PHKG1Q16816 387 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 FAM214AQ32MH5 1076 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 KRT71Q3SY84 523 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 CCDC153Q494R4 210 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 CCSMST1Q4G0I0 132 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms