RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SLC22A18Q96BI1 424 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 TAAR6Q96RI8 345 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 TTC1Q99614 292 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 SLX1AQ9BQ83 275 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 CARD6Q9BX69 1037 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 TSSK1BQ9BXA7 367 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 ZNF304Q9HCX3 659 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 CHRAC1Q9NRG0 131 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 RAB6BQ9NRW1 208 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 SEMA3GQ9NS98 782 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 OLAHQ9NV23 265 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 NXT1Q9UKK6 140 aaKnown RBP13.27□□□□□ -0.29
VARS-226ENST00000483275 CAPN6Q9Y6Q1 641 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 FAM169AQ9Y6X4 670 aa13.27□□□□□ -0.29
VARS-226ENST00000483275 GOLGA8KD6RF30 607 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 PRSS44E7EML9 344 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 GOLGA8TH3BQL2 631 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 PRMT5O14744 637 aaPredicted RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 CD3EAPO15446 510 aaKnown RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 JRKO75564 520 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 SUN1O94901 812 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 F8P00451 2351 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 HPP00738 406 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 APRTP07741 180 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 COX6A1P12074 109 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 FBLP22087 321 aaKnown RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 GRNP28799 593 aaKnown RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 ST13P50502 369 aaKnown RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 ZNF75DP51815 510 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 EIF3BP55884 814 aaKnown RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 PER3P56645 1201 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 SESN2P58004 480 aaPredicted RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 SNRPNP63162 240 aaKnown RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 ARG2P78540 354 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 TSTA3Q13630 321 aaPredicted RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 OASLQ15646 514 aaKnown RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 CTSL3PQ5NE16 218 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 B3GNTL1Q67FW5 361 aaPredicted RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 SUSD1Q6UWL2 747 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 CES3Q6UWW8 571 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 RNF44Q7L0R7 432 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 SHISA5Q8N114 240 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 OTUD6BQ8N6M0 293 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 PPHLN1Q8NEY8 458 aaKnown RBP13.26□□□□□ -0.29
VARS-226ENST00000483275 MIEF2Q96C03 454 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 MRFAP1L1Q96HT8 127 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 CABS1Q96KC9 395 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 YIPF2Q9BWQ6 316 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 P2RY12Q9H244 342 aa13.26□□□□□ -0.29
VARS-226ENST00000483275 CCDC168Q8NDH2 2452 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 SCN2AQ99250 2005 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 SCN3AQ9NY46 2000 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 H0YGG7 62 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 NIPSNAP2O75323 286 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 ZNF189O75820 626 aaPredicted RBP13.25□□□□□ -0.29
VARS-226ENST00000483275 UQCRHP07919 91 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 PRR35P0CG20 571 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 ERVK-10P10266 1014 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 NMBRP28336 390 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 EFNA3P52797 238 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 ARF3P61204 181 aaPredicted RBP13.25□□□□□ -0.29
VARS-226ENST00000483275 OCA2Q04671 838 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 SYT16Q17RD7 645 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 HKDC1Q2TB90 917 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 GAS2L3Q86XJ1 694 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 BCORP1Q8N888 145 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 OR2A1Q8NGT9 310 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 GSDMBQ8TAX9 411 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 PSMF1Q92530 271 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 DPH7Q9BTV6 452 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 ABCF3Q9NUQ8 709 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 TRPC4Q9UBN4 977 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 ZNF282Q9UDV7 671 aaPredicted RBP13.25□□□□□ -0.29
VARS-226ENST00000483275 SH3BGRL2Q9UJC5 107 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 GNPTGQ9UJJ9 305 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 ZNF148Q9UQR1 794 aa13.25□□□□□ -0.29
VARS-226ENST00000483275 NSG1A0A0A6YYJ2 146 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 ERI2A8K979 691 aaKnown RBP13.24□□□□□ -0.29
VARS-226ENST00000483275 ARHGEF33A8MVX0 844 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 GOLGA6L6A8MZA4 724 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 MIF4GDA9UHW6 222 aaKnown RBP13.24□□□□□ -0.29
VARS-226ENST00000483275 IDSB3KWA1 339 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 F8W8V4 182 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 WISP2O76076 250 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 SNRPB2P08579 225 aaKnown RBP13.24□□□□□ -0.29
VARS-226ENST00000483275 STSP08842 583 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 ARNTP27540 789 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 SOX11P35716 441 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 FDFT1P37268 417 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 TDGF1P3P51864 188 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 TERF1P54274 439 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 PMP22Q01453 160 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 FAM214AQ32MH5 1076 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.24□□□□□ -0.29
VARS-226ENST00000483275 AARS2Q5JTZ9 985 aaKnown RBP13.24□□□□□ -0.29
VARS-226ENST00000483275 YOD1Q5VVQ6 348 aaPredicted RBP13.24□□□□□ -0.29
VARS-226ENST00000483275 OTOAQ7RTW8 1153 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 MCEMP1Q8IX19 187 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 KBTBD2Q8IY47 623 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 PPFIBP2Q8ND30 876 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms