RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 OOSP2Q86WS3 158 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 C4orf33Q8N1A6 199 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 OR56A3Q8NH54 315 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 WDR48Q8TAF3 677 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 RHEBL1Q8TAI7 183 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 STAG3L4Q8TBR4 150 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 KLHL6Q8WZ60 621 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 ACAT2Q9BWD1 397 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 SGPP1Q9BX95 441 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 PITPNM3Q9BZ71 974 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 ZNF446Q9NWS9 450 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 CPSF2Q9P2I0 782 aaKnown RBP11.79□□□□□ -0.52
TRA2B-212ENST00000480461 RNF112Q9ULX5 631 aa11.79□□□□□ -0.52
TRA2B-212ENST00000480461 UQCRHLA0A096LP55 91 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 LRRC14BA6NHZ5 514 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 C2orf74A8MZ97 194 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 KLK8O60259 260 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 KERAO60938 352 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 SASH3O75995 380 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 UQCRHP07919 91 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 HIST1H2AGP0C0S8 130 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-212ENST00000480461 CCL4P13236 92 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 ST6GAL1P15907 406 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 HIST1H2ADP20671 130 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 CCKBRP32239 447 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 GGT5P36269 586 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 HSD17B2P37059 387 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 PPM1FP49593 454 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-212ENST00000480461 SEPHS1P49903 392 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 AGTR2P50052 363 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 LY6DQ14210 128 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 KCNAB1Q14722 419 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 SF1Q15637 639 aaKnown RBP11.78□□□□□ -0.52
TRA2B-212ENST00000480461 PTCHD3Q3KNS1 767 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 PHF19Q5T6S3 580 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 CACHD1Q5VU97 1274 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 EXOC3L1Q86VI1 746 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 SYTL1Q8IYJ3 562 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 RIBC1Q8N443 379 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-212ENST00000480461 BANPQ8N9N5 519 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 SMPDL3AQ92484 453 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 ZDHHC12Q96GR4 267 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 PRR11Q96HE9 360 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-212ENST00000480461 HIST1H2AHQ96KK5 128 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 TRAPPC9Q96Q05 1148 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 HIST1H2AJQ99878 128 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 DPYSL5Q9BPU6 564 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 TMEM79Q9BSE2 394 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 H2AFJQ9BTM1 129 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 TRIM54Q9BYV2 358 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 SYNPO2LQ9H987 977 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 FAM60AQ9NP50 221 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 OCIAD1Q9NX40 245 aa11.78□□□□□ -0.52
TRA2B-212ENST00000480461 UBR5O95071 2799 aaPredicted RBP11.77□□□□□ -0.53
TRA2B-212ENST00000480461 PRAMEF4O60810 478 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 WISP1O95388 367 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 CTSBP07858 339 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 ANXA5P08758 320 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 FGF3P11487 239 aaPredicted RBP11.77□□□□□ -0.53
TRA2B-212ENST00000480461 HGFP14210 728 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 FOLR1P15328 257 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 EPORP19235 508 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 OAS2P29728 719 aaKnown RBP11.77□□□□□ -0.53
TRA2B-212ENST00000480461 CRHR1P34998 444 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 GRIA3P42263 894 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 SLC6A12P48065 614 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 TMPRSS3P57727 454 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 TBPL1P62380 186 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 SH3BP2P78314 561 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 PRDX1Q06830 199 aaKnown RBP11.77□□□□□ -0.53
TRA2B-212ENST00000480461 SRSF1Q07955 248 aaKnown RBP eCLIP11.77□□□□□ -0.533e-8■□□□□ 9.4
TRA2B-212ENST00000480461 PRKAA1Q13131 559 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 MPP2Q14168 576 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 SLC5A12Q1EHB4 618 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 CDKL4Q5MAI5 379 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 PRAMEF9Q5VWM5 478 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 FCRL6Q6DN72 434 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 ARMC6Q6NXE6 501 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 FBXO42Q6P3S6 717 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 PRSS42Q7Z5A4 293 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 SRRM1Q8IYB3 904 aaKnown RBP11.77□□□□□ -0.53
TRA2B-212ENST00000480461 KLHDC8AQ8IYD2 350 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 BMPERQ8N8U9 685 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 PDPRQ8NCN5 879 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 OR2L3Q8NG85 312 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 EXT2Q93063 718 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 ALKBH8Q96BT7 664 aaKnown RBP11.77□□□□□ -0.53
TRA2B-212ENST00000480461 MOCOSQ96EN8 888 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 SLC41A2Q96JW4 573 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 CABS1Q96KC9 395 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 TMEM74Q96NL1 305 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 DEPDC7Q96QD5 511 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 MIPEPQ99797 713 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 MRPL57Q9BQC6 102 aaKnown RBP11.77□□□□□ -0.53
TRA2B-212ENST00000480461 RAB11FIP5Q9BXF6 653 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 TMBIM4Q9HC24 238 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 SLC6A20Q9NP91 592 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 C1GALT1Q9NS00 363 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 ABCF3Q9NUQ8 709 aa11.77□□□□□ -0.53
TRA2B-212ENST00000480461 CD274Q9NZQ7 290 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms