RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 RCCD1A6NED2 376 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 NPIPA5E9PKD4 350 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 ADAM10O14672 748 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 PRPF4O43172 522 aaKnown RBP eCLIP10.05□□□□□ -0.8
APTX-222ENST00000478279 ASNA1O43681 348 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 RPN2P04844 631 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 OR56A5P0C7T3 313 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 DRD2P14416 443 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 ABOP16442 354 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 RBL1P28749 1068 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 SLC1A1P43005 524 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 IST1P53990 364 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 TYRO3Q06418 890 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 DSG2Q14126 1118 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 PRPSAP1Q14558 356 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 SLC18A3Q16572 532 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 TMEM205Q6UW68 189 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 EID3Q8N140 333 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 AMER2Q8N7J2 671 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 CHDHQ8NE62 594 aaPredicted RBP10.05□□□□□ -0.8
APTX-222ENST00000478279 HAUS1Q96CS2 278 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 CDKN2AIPNLQ96HQ2 116 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 C10orf90Q96M02 699 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 FOXC2Q99958 501 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 TUBB6Q9BUF5 446 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 YIPF2Q9BWQ6 316 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 TGIF2Q9GZN2 237 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 CXXC4Q9H2H0 198 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 ARNT2Q9HBZ2 717 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 C14orf105Q9NVL8 296 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 NLE1Q9NVX2 485 aaPredicted RBP10.05□□□□□ -0.8
APTX-222ENST00000478279 CIDEBQ9UHD4 219 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 SLC39A10Q9ULF5 831 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 PPT2Q9UMR5 302 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 NPIPA1Q9UND3 350 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 LUC7L2Q9Y383 392 aaKnown RBP10.05□□□□□ -0.8
APTX-222ENST00000478279 KLK4Q9Y5K2 254 aa10.05□□□□□ -0.8
APTX-222ENST00000478279 LOC105369274A0A096LPK9 316 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 LOC102723532A0A0G2JNH3 316 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 A0A0J9YVX5 310 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 A8MUI8 341 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 PRRG2O14669 202 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 RASGRF2O14827 1237 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 TSPAN12O95859 305 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 SERPINC1P01008 464 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 EIF2S1P05198 315 aaKnown RBP10.04□□□□□ -0.8
APTX-222ENST00000478279 KLK2P20151 261 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 PSMB4P28070 264 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 EEF1DP29692 281 aaKnown RBP10.04□□□□□ -0.8
APTX-222ENST00000478279 EMP3P54852 163 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 CSE1LP55060 971 aaKnown RBP10.04□□□□□ -0.8
APTX-222ENST00000478279 PPP2R2AP63151 447 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 PRTGQ2VWP7 1150 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 PACS1Q6VY07 963 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 RNF44Q7L0R7 432 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 SIAH3Q8IW03 269 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 DCUN1D3Q8IWE4 304 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 CHERPQ8IWX8 916 aaKnown RBP10.04□□□□□ -0.8
APTX-222ENST00000478279 SLC22A15Q8IZD6 547 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 OR4N4Q8N0Y3 316 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 GHDCQ8N2G8 530 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 MDS2Q8NDY4 140 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 IQCDQ96DY2 449 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 MVB12AQ96EY5 273 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 SCMH1Q96GD3 660 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 CABS1Q96KC9 395 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 ZNF354BQ96LW1 612 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 FRMD6Q96NE9 622 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 TBL1YQ9BQ87 522 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 TRIM51Q9BSJ1 452 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 HES7Q9BYE0 225 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 C10orf88Q9H8K7 445 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 MKKSQ9NPJ1 570 aaPredicted RBP10.04□□□□□ -0.8
APTX-222ENST00000478279 KLHL1Q9NR64 748 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 IMPACTQ9P2X3 320 aa10.04□□□□□ -0.8
APTX-222ENST00000478279 F8W8V4 182 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 H7C0C1 242 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 FFAR3O14843 346 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 GPR42O15529 346 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 ZNHIT1O43257 154 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 ERVK-10P10266 1014 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 CD46P15529 392 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 SLC26A3P40879 764 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 ATP5OP48047 213 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 TUBA3CQ13748 450 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 SPARCL1Q14515 664 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 OR1C1Q15619 314 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 ASTE1Q2TB18 679 aaPredicted RBP10.03□□□□□ -0.8
APTX-222ENST00000478279 ACER2Q5QJU3 275 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 ANKRD20A2Q5SQ80 823 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 ANKRD20A1Q5TYW2 823 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 ANKRD20A3Q5VUR7 823 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 CES4AQ5XG92 561 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 H3F3CQ6NXT2 135 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 TUBA3EQ6PEY2 450 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 UNC5DQ6UXZ4 953 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 C3P1Q6ZMU1 363 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 TMEM200AQ86VY9 491 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 VRK3Q8IV63 474 aa10.03□□□□□ -0.8
APTX-222ENST00000478279 RHOT2Q8IXI1 618 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms