RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	CXorf49	A8MYA2	514 aa	Predicted RBP	4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188		H3BMM5	538 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	IFRD1	O00458	451 aa	Predicted RBP	4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	POLR1C	O15160	346 aa	Predicted RBP	4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	KLF7	O75840	302 aa	Predicted RBP	4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	CEACAM4	O75871	244 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	RAB40AL	P0C0E4	278 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	CBSL	P0DN79	551 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	IMPA1	P29218	277 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	CBS	P35520	551 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	GRIA3	P42263	894 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	ACY1	Q03154	408 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	PLCL1	Q15111	1095 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	PRTG	Q2VWP7	1150 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	SYTL3	Q4VX76	610 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	HSP90AA5P	Q58FG0	334 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	SAMD5	Q5TGI4	173 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	KLHL35	Q6PF15	583 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	SBSN	Q6UWP8	590 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	CYS1	Q717R9	158 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	PCGF5	Q86SE9	256 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	KLHL7	Q8IXQ5	586 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	SHISA5	Q8N114	240 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	ESX1	Q8N693	406 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	C10orf90	Q96M02	699 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	PANX3	Q96QZ0	392 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	GPR21	Q99679	349 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	ERP44	Q9BS26	406 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	FAM167B	Q9BTA0	163 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	SYTL2	Q9HCH5	934 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	MLXIPL	Q9NP71	852 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	IARS2	Q9NSE4	1012 aa	Known RBP	4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	CIDEB	Q9UHD4	219 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	CHMP2B	Q9UQN3	213 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	ASF1A	Q9Y294	204 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	MRFAP1	Q9Y605	127 aa		4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	GCN1	Q92616	2671 aa	Known RBP	4.07	□□□□□ -1.76
POLR2B-208	ENST00000478188	NBPF19	A0A087WUL8	3843 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	AHCTF1	Q8WYP5	2266 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	MED13	Q9UHV7	2174 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188		A0A1W2PQ72	361 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	PIPSL	A2A3N6	862 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	HMX2	A2RU54	273 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	NKX2-8	O15522	239 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	NDUFS3	O75489	264 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	FKBP9	O95302	570 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	TTC4	O95801	387 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	APOA4	P06727	396 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	CSE1L	P55060	971 aa	Known RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	NFKB2	Q00653	900 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	RELA	Q04206	551 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	HSPA14	Q0VDF9	509 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	DNASE1L3	Q13609	305 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	HIF1A	Q16665	826 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	UGT8	Q16880	541 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	KLHL38	Q2WGJ6	581 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	MANEA	Q5SRI9	462 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	BROX	Q5VW32	411 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	SYT10	Q6XYQ8	523 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	CCDC81	Q6ZN84	652 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	ZC3HC1	Q86WB0	502 aa	Known RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	PPP1R3B	Q86XI6	285 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	CPNE9	Q8IYJ1	553 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	OR2L3	Q8NG85	312 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	ZNF480	Q8WV37	535 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	TCTN2	Q96GX1	697 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	PDLIM5	Q96HC4	596 aa	Known RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	SGPP1	Q9BX95	441 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	ULBP3	Q9BZM4	244 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	AICDA	Q9GZX7	198 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	SPRTN	Q9H040	489 aa	Predicted RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	ASIC3	Q9UHC3	531 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	KLHL20	Q9Y2M5	609 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	ATRX	P46100	2492 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	UBA6	A0AVT1	1052 aa	Predicted RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	ZNF891	A8MT65	544 aa	Predicted RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	C21orf140	B9A014	251 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	TMEM150C	B9EJG8	249 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188		E7ENX8	843 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	KPNA5	O15131	536 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	EIF3H	O15372	352 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	CPNE3	O75131	537 aa	Known RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	PDGFA	P04085	211 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	UMOD	P07911	640 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	FAM157B	P0CG42	384 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	PAM	P19021	973 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	MAG	P20916	626 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	CCNF	P41002	786 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	SARNP	P82979	210 aa	Known RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	TAP2	Q03519	686 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	TNP2	Q05952	138 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	CUL1	Q13616	776 aa		4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	NAA30	Q147X3	362 aa	Predicted RBP	4.06	□□□□□ -1.76
POLR2B-208	ENST00000478188	ARHGAP19	Q14CB8	494 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms