RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 LRRC38Q5VT99 294 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 MFSD14CQ5VZR4 134 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 IGFL4Q6B9Z1 124 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 TTC27Q6P3X3 843 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 TTC33Q6PID6 262 aaPredicted RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 NCEH1Q6PIU2 408 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 TMIGD1Q6UXZ0 262 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 BZW1Q7L1Q6 419 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 PARS2Q7L3T8 475 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 TRAPPC11Q7Z392 1133 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 TMPRSS9Q7Z410 1059 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 HAUS6Q7Z4H7 955 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 KCTD20Q7Z5Y7 419 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 MRGPREQ86SM8 312 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 YRDCQ86U90 279 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 WDR5BQ86VZ2 330 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 FAM228AQ86W67 206 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 CCDC25Q86WR0 208 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 FAM90A1Q86YD7 464 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 PDSS2Q86YH6 399 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 TICAM1Q8IUC6 712 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 FOXRED2Q8IWF2 684 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 GPR65Q8IYL9 337 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 DCP1BQ8IZD4 617 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 MCOLN2Q8IZK6 566 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 Q8N1X5 172 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 FRMD1Q8N878 549 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 ASCC1Q8N9N2 400 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 POC5Q8NA72 575 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 CPEB3Q8NE35 698 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 BPIFCQ8NFQ6 507 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 OR6B3Q8NGW1 331 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 NDNFQ8TB73 568 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 PROKR1Q8TCW9 393 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 ROBO4Q8WZ75 1007 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 RFT1Q96AA3 541 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 PERPQ96FX8 193 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC35A4Q96G79 324 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 C5orf30Q96GV9 206 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 MARS2Q96GW9 593 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 ANKRD36BP1Q96IX9 119 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 COQ10AQ96MF6 247 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 NSMCE3Q96MG7 304 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF317Q96PQ6 595 aaPredicted RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 KLHL5Q96PQ7 755 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 CCNL2Q96S94 520 aaPredicted RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 PCDHB18PQ96TA0 734 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 PSD2Q9BQI7 771 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 ZSWIM1Q9BR11 485 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 PIGQQ9BRB3 760 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 MXRA8Q9BRK3 442 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 C11orf70Q9BRQ4 267 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 UBAC1Q9BSL1 405 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 RTKNQ9BST9 563 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 SPATA16Q9BXB7 569 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 FRMD8Q9BZ67 464 aaPredicted RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 WDR11Q9BZH6 1224 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 NDEL1Q9GZM8 345 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 DNTTIP1Q9H147 329 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 KCNN2Q9H2S1 579 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 VCX2Q9H322 139 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 TMEM245Q9H330 911 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 TP63Q9H3D4 680 aaPredicted RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 SNX25Q9H3E2 840 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 CATSPERBQ9H7T0 1116 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 EVA1AQ9H8M9 152 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 MRPL47Q9HD33 250 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 TREX1Q9NSU2 369 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 ETNK2Q9NVF9 386 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 PNPOQ9NVS9 261 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 NKIRAS1Q9NYS0 192 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 RBAKQ9NYW8 714 aaPredicted RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 VSX1Q9NZR4 365 aaPredicted RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 RNF181Q9P0P0 153 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 CLEC2DQ9UHP7 191 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC24A2Q9UI40 661 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 KCNE5Q9UJ90 142 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 GMEB2Q9UKD1 530 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 RAB23Q9ULC3 237 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 HSF4Q9ULV5 492 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 STAP1Q9ULZ2 295 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 SNX7Q9UNH6 387 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 FAF1Q9UNN5 650 aaPredicted RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 MAP3K2Q9Y2U5 619 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 STRAPQ9Y3F4 350 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 HS3ST3A1Q9Y663 406 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 ARHGAP31Q2M1Z3 1444 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 ATXN2Q99700 1313 aaKnown RBP3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF541Q9H0D2 1346 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 E9PCH4 1651 aa3.43□□□□□ -1.86
FNDC3B-209ENST00000478016 NKTRP30414 1462 aaKnown RBP3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 IQGAP3Q86VI3 1631 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 CENPVL1A0A0U1RR11 272 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 SMIM30A4D0T7 59 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 MTMR11A4FU01 709 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 KDM4EB2RXH2 506 aaPredicted RBP3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 HAS3O00219 553 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 PLK4O00444 970 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms