RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 PRAMEF4O60810 478 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 CTSVO60911 334 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 SIX3O95343 332 aaPredicted RBP15.27■□□□□ 0.04
COPS3-207ENST00000477299 CSTF2P33240 577 aaKnown RBP eCLIP15.27■□□□□ 0.04
COPS3-207ENST00000477299 HSD17B2P37059 387 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 GABRA4P48169 554 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 MAPK10P53779 464 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 PRDX1Q06830 199 aaKnown RBP15.27■□□□□ 0.04
COPS3-207ENST00000477299 PFKFB4Q16877 469 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 TNFAIP8L3Q5GJ75 292 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 PRAMEF9Q5VWM5 478 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 PRAMEF13Q5VWM6 474 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 SULT1C3Q6IMI6 304 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 RPS27LQ71UM5 84 aaKnown RBP15.27■□□□□ 0.04
COPS3-207ENST00000477299 ERMP1Q7Z2K6 904 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 EXOC3L1Q86VI1 746 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 FAM129CQ86XR2 697 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 PLD3Q8IV08 490 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 RIBC1Q8N443 379 aaPredicted RBP15.27■□□□□ 0.04
COPS3-207ENST00000477299 D2HGDHQ8N465 521 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 BANPQ8N9N5 519 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 PDPRQ8NCN5 879 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 AGBL5Q8NDL9 886 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 CABS1Q96KC9 395 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 TSNARE1Q96NA8 513 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 CD180Q99467 661 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 DPH7Q9BTV6 452 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 STRADBQ9C0K7 418 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 WWOXQ9NZC7 414 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 NUDT4Q9NZJ9 180 aa15.27■□□□□ 0.04
COPS3-207ENST00000477299 SCN3AQ9NY46 2000 aa15.27■□□□□ 0.03
COPS3-207ENST00000477299 CCDC88CQ9P219 2028 aa15.27■□□□□ 0.03
COPS3-207ENST00000477299 FER1L5A0AVI2 2057 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 H7BY64 318 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 MATN2O00339 956 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 PLD2O14939 933 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 HGSO14964 777 aaPredicted RBP15.26■□□□□ 0.03
COPS3-207ENST00000477299 TOX3O15405 576 aaPredicted RBP15.26■□□□□ 0.03
COPS3-207ENST00000477299 RGS16O15492 202 aaPredicted RBP15.26■□□□□ 0.03
COPS3-207ENST00000477299 KLK8O60259 260 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 SASH3O75995 380 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 ZBTB11O95625 1053 aaPredicted RBP15.26■□□□□ 0.03
COPS3-207ENST00000477299 RBP1P09455 135 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 CDH1P12830 882 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 GABREP78334 506 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 HSD11B2P80365 405 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 MEF2AQ02078 507 aaPredicted RBP15.26■□□□□ 0.03
COPS3-207ENST00000477299 TSNAXIP1Q2TAA8 658 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 CATSPEREQ5SY80 951 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 PRAMEF17Q5VTA0 474 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 CAPN13Q6MZZ7 669 aaPredicted RBP15.26■□□□□ 0.03
COPS3-207ENST00000477299 FBXO42Q6P3S6 717 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 KLC3Q6P597 504 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 C19orf47Q8N9M1 422 aaKnown RBP15.26■□□□□ 0.03
COPS3-207ENST00000477299 WDR36Q8NI36 951 aaKnown RBP15.26■□□□□ 0.03
COPS3-207ENST00000477299 PHF21BQ96EK2 531 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 PRAP1Q96NZ9 151 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 MRPL57Q9BQC6 102 aaKnown RBP15.26■□□□□ 0.03
COPS3-207ENST00000477299 SPNS1Q9H2V7 528 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 MRPS30Q9NP92 439 aaKnown RBP15.26■□□□□ 0.03
COPS3-207ENST00000477299 SOHLH2Q9NX45 425 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 SLC17A7Q9P2U7 560 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 BTRCQ9Y297 605 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 MSRB2Q9Y3D2 182 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 NEUROG3Q9Y4Z2 214 aa15.26■□□□□ 0.03
COPS3-207ENST00000477299 PABPN1LA6NDY0 278 aaKnown RBP15.25■□□□□ 0.03
COPS3-207ENST00000477299 ZNF839A8K0R7 811 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 G3V2L1 256 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 TMX2-CTNND1H3BSU7 103 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 COPEO14579 308 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 DLX3O60479 287 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 WDR47O94967 919 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 TNFSF15O95150 251 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 TIAF1O95411 115 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 STATHP02808 62 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 PROCP04070 461 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 EPORP19235 508 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 CMPK1P30085 196 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 CRHR1P34998 444 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 GGT5P36269 586 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 FOXM1Q08050 763 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 LCTLQ6UWM7 567 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 PAQR7Q86WK9 346 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 DNAJC22Q8N4W6 341 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 PTGR2Q8N8N7 351 aaPredicted RBP15.25■□□□□ 0.03
COPS3-207ENST00000477299 ZNF740Q8NDX6 193 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 ATL1Q8WXF7 558 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 USP7Q93009 1102 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 NEIL2Q969S2 332 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 SLC22A18Q96BI1 424 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 ARL8AQ96BM9 186 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 OR6C1Q96RD1 312 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 CMKLR1Q99788 373 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 CD244Q9BZW8 370 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 SPRTNQ9H040 489 aaPredicted RBP15.25■□□□□ 0.03
COPS3-207ENST00000477299 MRPL46Q9H2W6 279 aaKnown RBP15.25■□□□□ 0.03
COPS3-207ENST00000477299 ZNF446Q9NWS9 450 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 SLC39A1Q9NY26 324 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 DCDC2Q9UHG0 476 aa15.25■□□□□ 0.03
COPS3-207ENST00000477299 LOC105369274A0A096LPK9 316 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms