RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ZNF347Q96SE7 839 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 OR51F1A6NGY5 319 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 CLCNKAP51800 687 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 ENPP2Q13822 863 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 RAB30Q15771 203 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 RALGPS1Q5JS13 557 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 OR4K17Q8NGC6 315 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 CEP76Q8TAP6 659 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 FUBP3Q96I24 572 aaKnown RBP eCLIP18.15■□□□□ 0.5
VARS2-209ENST00000477288 APOBEC3GQ9HC16 384 aaKnown RBP18.15■□□□□ 0.5
VARS2-209ENST00000477288 LYARQ9NX58 379 aaKnown RBP18.15■□□□□ 0.5
VARS2-209ENST00000477288 A0A1W2PRQ8 180 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 CDC7O00311 574 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 KAT7O95251 611 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 ZNF3P17036 446 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 RORCP51449 518 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 KLHL36Q8N4N3 616 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 ZNF611Q8N823 705 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 CNDP2Q96KP4 475 aaKnown RBP18.15■□□□□ 0.5
VARS2-209ENST00000477288 POLR2J3Q9H1A7 115 aaKnown RBP18.15■□□□□ 0.5
VARS2-209ENST00000477288 FBXL12Q9NXK8 326 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 SPIN1Q9Y657 262 aaPredicted RBP18.15■□□□□ 0.5
VARS2-209ENST00000477288 ERI3O43414 337 aaKnown RBP18.15■□□□□ 0.5
VARS2-209ENST00000477288 KDM4BO94953 1096 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 CCNOP22674 350 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 CSTF2P33240 577 aaKnown RBP eCLIP18.15■□□□□ 0.5
VARS2-209ENST00000477288 ASPAP45381 313 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 PRAMEF14Q5SWL7 426 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 PRAMEF13Q5VWM6 474 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 PLCZ1Q86YW0 608 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 CELF5Q8N6W0 485 aaKnown RBP18.15■□□□□ 0.5
VARS2-209ENST00000477288 PDPRQ8NCN5 879 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 ROPN1LQ96C74 230 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 POLR2J2Q9GZM3 115 aaKnown RBP18.15■□□□□ 0.5
VARS2-209ENST00000477288 BTBD1Q9H0C5 482 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 PAK6Q9NQU5 681 aaPredicted RBP18.15■□□□□ 0.5
VARS2-209ENST00000477288 ZNF536O15090 1300 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 RFT1Q96AA3 541 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 RGMAQ96B86 450 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 KCNC2Q96PR1 638 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 ZCCHC3Q9NUD5 404 aaKnown RBP18.15■□□□□ 0.5
VARS2-209ENST00000477288 CNTN6Q9UQ52 1028 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 KLK3P07288 261 aaPredicted RBP18.14■□□□□ 0.5
VARS2-209ENST00000477288 ZNF16P17020 682 aaPredicted RBP18.14■□□□□ 0.5
VARS2-209ENST00000477288 XKP51811 444 aa18.14■□□□□ 0.5
VARS2-209ENST00000477288 CNKSR3Q6P9H4 555 aa18.14■□□□□ 0.5
VARS2-209ENST00000477288 ASB18Q6ZVZ8 466 aa18.14■□□□□ 0.5
VARS2-209ENST00000477288 TRPV4Q9HBA0 871 aa18.14■□□□□ 0.5
VARS2-209ENST00000477288 FANCFQ9NPI8 374 aa18.14■□□□□ 0.5
VARS2-209ENST00000477288 METTL21EPA6NDL7 271 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 CLPXO76031 633 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 ATF6P18850 670 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 CSNK2A2P19784 350 aaPredicted RBP18.14■□□□□ 0.49
VARS2-209ENST00000477288 CRB2Q5IJ48 1285 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 USP43Q70EL4 1123 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 LRRTM4Q86VH4 590 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 TMEM17Q86X19 198 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 DCAKDQ8WVC6 231 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 TTYH2Q9BSA4 534 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 SEZ6LQ9BYH1 1024 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 ZDHHC3Q9NYG2 299 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 OAZ2O95190 189 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 CSTBP04080 98 aaKnown RBP18.14■□□□□ 0.49
VARS2-209ENST00000477288 CCL5P13501 91 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 NRIP1P48552 1158 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 S100A10P60903 97 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 SH3PXD2AQ5TCZ1 1133 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 CCM2Q9BSQ5 444 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 NUSAP1Q9BXS6 441 aaKnown RBP18.14■□□□□ 0.49
VARS2-209ENST00000477288 ZNF69Q9UC07 566 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 PLEKHA6Q9Y2H5 1048 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 DUXAA6NLW8 204 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 AOC2O75106 756 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 ITGA10O75578 1167 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 PIM1P11309 404 aaPredicted RBP18.14■□□□□ 0.49
VARS2-209ENST00000477288 PTX3P26022 381 aaPredicted RBP18.14■□□□□ 0.49
VARS2-209ENST00000477288 PEX2P28328 305 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 RUNDC3AQ59EK9 446 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 LRRC69Q6ZNQ3 347 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 FAM124BQ9H5Z6 455 aaPredicted RBP18.14■□□□□ 0.49
VARS2-209ENST00000477288 CCSER2Q9H7U1 834 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 B3GAT2Q9NPZ5 323 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 KCND1Q9NSA2 647 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 REXO2Q9Y3B8 237 aaKnown RBP18.14■□□□□ 0.49
VARS2-209ENST00000477288 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.14■□□□□ 0.49
VARS2-209ENST00000477288 LOC100509620A0A075B734 347 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 NPHS1O60500 1241 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 IQCCQ4KMZ1 466 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 TXNDC8Q6A555 127 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 C7orf57Q8NEG2 295 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 ZSCAN5AQ9BUG6 496 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 ANKRA2Q9H9E1 313 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 TIMMDC1Q9NPL8 285 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 SDHAF3Q9NRP4 125 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 AASSQ9UDR5 926 aa18.14■□□□□ 0.49
VARS2-209ENST00000477288 TACSTD2P09758 323 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 C1orf94Q6P1W5 598 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 CAMKVQ8NCB2 501 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 DENND6BQ8NEG7 585 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 HAPLN3Q96S86 360 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms