RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 NFKBIL1Q9UBC1 381 aaPredicted RBP15.98■□□□□ 0.15
TMEM53-208ENST00000476724 H0Y858 1186 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 GNGT2O14610 69 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 PRMT3O60678 531 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 AMD1P17707 334 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 PON2Q15165 354 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 RAB30Q15771 203 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 C12orf40Q86WS4 652 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 CLVS1Q8IUQ0 354 aaPredicted RBP15.98■□□□□ 0.15
TMEM53-208ENST00000476724 CHST14Q8NCH0 376 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 CLHC1Q8NHS4 586 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 REXO5Q96IC2 774 aaKnown RBP15.98■□□□□ 0.15
TMEM53-208ENST00000476724 MUS81Q96NY9 551 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 HHIPQ96QV1 700 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 P2RY13Q9BPV8 354 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 RBM4BQ9BQ04 359 aaKnown RBP15.98■□□□□ 0.15
TMEM53-208ENST00000476724 RBM4Q9BWF3 364 aaKnown RBP15.98■□□□□ 0.15
TMEM53-208ENST00000476724 OSBPL10Q9BXB5 764 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 SLC22A14Q9Y267 594 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 XIRP2A4UGR9 3374 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 PRKD3O94806 890 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 SLCO2B1O94956 709 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 HOXB9P17482 250 aaPredicted RBP15.97■□□□□ 0.15
TMEM53-208ENST00000476724 SDC1P18827 310 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 PRPS1L1P21108 318 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 FSHRP23945 695 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 TRPC1P48995 793 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 NEK2P51955 445 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 ABRQ12979 859 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 CSTF3Q12996 717 aaKnown RBP15.97■□□□□ 0.15
TMEM53-208ENST00000476724 PLCL1Q15111 1095 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 PLA2G4EQ3MJ16 856 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 DNAJC14Q6Y2X3 702 aaPredicted RBP15.97■□□□□ 0.15
TMEM53-208ENST00000476724 THAP5Q7Z6K1 395 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 VRK3Q8IV63 474 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 TRAM1L1Q8N609 369 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 PJA1Q8NG27 643 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 CYB5D2Q8WUJ1 264 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 ATL1Q8WXF7 558 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 ELMO1Q92556 727 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 METTL2AQ96IZ6 378 aaKnown RBP15.97■□□□□ 0.15
TMEM53-208ENST00000476724 FCRL1Q96LA6 429 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 ASB16Q96NS5 453 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 CARS2Q9HA77 564 aaKnown RBP15.97■□□□□ 0.15
TMEM53-208ENST00000476724 HPS4Q9NQG7 708 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 CD84Q9UIB8 345 aa15.97■□□□□ 0.15
TMEM53-208ENST00000476724 NNMTP40261 264 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 HALP42357 657 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 SRSF11Q05519 484 aaKnown RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 MESP2Q0VG99 397 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 CHIT1Q13231 466 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 GTDC1Q4AE62 458 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 RBM48Q5RL73 367 aaKnown RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 KIAA0907Q7Z7F0 614 aaPredicted RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 C8orf59Q8N0T1 100 aaPredicted RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 EID3Q8N140 333 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 ZCCHC7Q8N3Z6 543 aaKnown RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 FAM86B1Q8N7N1 296 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 DDHD1Q8NEL9 900 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 ZNF555Q8NEP9 628 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 OR5K1Q8NHB7 308 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 NCLNQ969V3 563 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 ISOC1Q96CN7 298 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 APIPQ96GX9 242 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 TSSK3Q96PN8 268 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 FAM83CQ9BQN1 747 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 CXorf21Q9HAI6 301 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 IFT80Q9P2H3 777 aaPredicted RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 TSPAN11A1L157 253 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 OTOL1A6NHN0 477 aaPredicted RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 EVPLLA8MZ36 301 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 RFXANKO14593 260 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 SLC9A3R1O14745 358 aaPredicted RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 GSTM1P09488 218 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 MAP4P27816 1152 aaKnown RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 PTPN6P29350 595 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 MAPK9P45984 424 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 PFN3P60673 137 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 PPP2R2BQ00005 443 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 GSTM4Q03013 218 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 MTAPQ13126 283 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 NKG7Q16617 165 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 PGS1Q32NB8 556 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 ZIK1Q3SY52 487 aaPredicted RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 NOXRED1Q6NXP6 359 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 CYP2U1Q7Z449 544 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 PHACTR4Q8IZ21 702 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 PYCR2Q96C36 320 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 ZSCAN5AQ9BUG6 496 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 ING2Q9H160 280 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 SOX17Q9H6I2 414 aaPredicted RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 MBD1Q9UIS9 605 aaPredicted RBP15.96■□□□□ 0.15
TMEM53-208ENST00000476724 ERVW-1Q9UQF0 538 aa15.96■□□□□ 0.15
TMEM53-208ENST00000476724 DOCK8Q8NF50 2099 aa15.96■□□□□ 0.14
TMEM53-208ENST00000476724 CISD3P0C7P0 127 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 ADH5P11766 374 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 POLR2EP19388 210 aaKnown RBP15.95■□□□□ 0.14
TMEM53-208ENST00000476724 KIR3DL1P43629 444 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 IRF8Q02556 426 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 HYAL1Q12794 435 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms