RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ALPK1Q96QP1 1244 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 CPPED1Q9BRF8 314 aaPredicted RBP6.69□□□□□ -1.34
UBR4-212ENST00000475973 FUNDC2Q9BWH2 189 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 IKZF5Q9H5V7 419 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 SOX17Q9H6I2 414 aaPredicted RBP6.69□□□□□ -1.34
UBR4-212ENST00000475973 IL1RL2Q9HB29 575 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 FANCEQ9HB96 536 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 POLMQ9NP87 494 aaPredicted RBP6.69□□□□□ -1.34
UBR4-212ENST00000475973 SEMA4BQ9NPR2 832 aaPredicted RBP6.69□□□□□ -1.34
UBR4-212ENST00000475973 FAM86C1Q9NVL1 165 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 RHBDL2Q9NX52 303 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 VAPAQ9P0L0 249 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 FBXO10Q9UK96 956 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 AGO1Q9UL18 857 aaKnown RBP6.69□□□□□ -1.34
UBR4-212ENST00000475973 NDRG4Q9ULP0 352 aaKnown RBP6.69□□□□□ -1.34
UBR4-212ENST00000475973 RNF112Q9ULX5 631 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 PDE10AQ9Y233 779 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 MRPS23Q9Y3D9 190 aaKnown RBP6.69□□□□□ -1.34
UBR4-212ENST00000475973 UGT2A1Q9Y4X1 527 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 PCDHB1Q9Y5F3 818 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 GPC6Q9Y625 555 aaPredicted RBP6.69□□□□□ -1.34
UBR4-212ENST00000475973 PMF1-BGLAPU3KQ54 211 aa6.69□□□□□ -1.34
UBR4-212ENST00000475973 NCOR1O75376 2440 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 KCNE1BA0A087WTH5 132 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 A0A096LPI6 279 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 LOC100130705A0A1B0GUX0 176 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 OR6C75A6NL08 312 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 CLDN24A6NM45 220 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 SUPT3HB4E1H0 165 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 ANKRD66B4E2M5 251 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 CLDN25C9JDP6 229 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 C9JVG2 144 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 ANHXE9PGG2 379 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 G3V2T6 193 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 EIF3FO00303 357 aaPredicted RBP6.68□□□□□ -1.34
UBR4-212ENST00000475973 SLC28A1O00337 649 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 WNT9AO14904 365 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 SLC22A1O15245 554 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 INSIG1O15503 277 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 ADAM12O43184 909 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 NARSO43776 548 aaKnown RBP6.68□□□□□ -1.34
UBR4-212ENST00000475973 DFNA5O60443 496 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 TPST1O60507 370 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 GFRA3O60609 400 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 SCN2BO60939 215 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 VPS26AO75436 327 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 SUPT3HO75486 399 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 GJB3O75712 270 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 BCL10O95999 233 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 HNRNPCP07910 306 aaKnown RBP eCLIP6.68□□□□□ -1.34
UBR4-212ENST00000475973 EBLN1P0CF75 366 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 EPORP19235 508 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 OPRL1P41146 370 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 YAP1P46937 504 aaKnown RBP6.68□□□□□ -1.34
UBR4-212ENST00000475973 CDH4P55283 916 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 ARPP19P56211 112 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 CLDN8P56748 225 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 IL2P60568 153 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 IFITM3Q01628 133 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 GNA12Q03113 381 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 MVKQ03426 396 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 EMX1Q04741 257 aaPredicted RBP6.68□□□□□ -1.34
UBR4-212ENST00000475973 CHRNB3Q05901 458 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 ZNF33BQ06732 778 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 POU4F2Q12837 409 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 MAD2L1Q13257 205 aaPredicted RBP6.68□□□□□ -1.34
UBR4-212ENST00000475973 KCNAB2Q13303 367 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 CDK5R2Q13319 367 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 PLD1Q13393 1074 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 E2F2Q14209 437 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 PLCL1Q15111 1095 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 PON2Q15165 354 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 RPS6KA2Q15349 733 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 GEN1Q17RS7 908 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 CTXN3Q4LDR2 81 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 ATP6AP1LQ52LC2 224 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 SLC44A4Q53GD3 710 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 INO80DQ53TQ3 878 aaPredicted RBP6.68□□□□□ -1.34
UBR4-212ENST00000475973 CPZQ66K79 652 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 TPGS2Q68CL5 300 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 SLC8B1Q6J4K2 584 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 PSAPL1Q6NUJ1 521 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 FAHD1Q6P587 224 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 SHQ1Q6PI26 577 aaKnown RBP6.68□□□□□ -1.34
UBR4-212ENST00000475973 NCEH1Q6PIU2 408 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 C19orf48Q6RUI8 117 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 ZNF783Q6ZMS7 281 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 CHST15Q7LFX5 561 aaPredicted RBP6.68□□□□□ -1.34
UBR4-212ENST00000475973 ZNF551Q7Z340 670 aaPredicted RBP6.68□□□□□ -1.34
UBR4-212ENST00000475973 KDELC2Q7Z4H8 507 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 GOLGA7Q7Z5G4 137 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 TMEM179BQ7Z7N9 219 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 ADAMTSL2Q86TH1 951 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 HIPK1Q86Z02 1210 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 ZDHHC13Q8IUH4 622 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 KLHDC8AQ8IYD2 350 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 MICU2Q8IYU8 434 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 STK40Q8N2I9 435 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 SLC44A3Q8N4M1 653 aa6.68□□□□□ -1.34
UBR4-212ENST00000475973 FAM86B1Q8N7N1 296 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms