RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SH2B3Q9UQQ2 575 aa13.28□□□□□ -0.28
TRAF4-210ENST00000475329 CCL27Q9Y4X3 112 aa13.28□□□□□ -0.28
TRAF4-210ENST00000475329 HEATR5BQ9P2D3 2071 aa13.28□□□□□ -0.28
TRAF4-210ENST00000475329 A0A1W2PR77 199 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 A6NCN8 305 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 H0YIV9 168 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 GYG2O15488 501 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 C1GALT1C1LP0DN25 315 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 CTSEP14091 401 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 BCKDHBP21953 392 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 GPX3P22352 226 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 HOXA6P31267 233 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 EMX2Q04743 252 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 CSTF3Q12996 717 aaKnown RBP13.27□□□□□ -0.29
TRAF4-210ENST00000475329 LAPTM5Q13571 262 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 CUL3Q13618 768 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 CYLC2Q14093 348 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-210ENST00000475329 TCEA2Q15560 299 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 AP5B1Q2VPB7 878 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 DNAL1Q4LDG9 190 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 AGKQ53H12 422 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 C10orf62Q5T681 223 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-210ENST00000475329 MED27Q6P2C8 311 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 NXPE4Q6UWF7 544 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 C17orf64Q86WR6 236 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 NRROSQ86YC3 692 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 C2orf73Q8N5S3 287 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-210ENST00000475329 OR52E1Q8NGJ3 308 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 HMGCLL1Q8TB92 370 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 SH3KBP1Q96B97 665 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 CXorf40BQ96DE9 158 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 RTKNQ9BST9 563 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 BRINP2Q9C0B6 783 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 PELI2Q9HAT8 420 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 SDR39U1Q9NRG7 319 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-210ENST00000475329 NOP53Q9NZM5 478 aaKnown RBP13.27□□□□□ -0.29
TRAF4-210ENST00000475329 TAC3Q9UHF0 121 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 PCDHGA11Q9Y5H2 935 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 SLCO1B1Q9Y6L6 691 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 SNRNP200O75643 2136 aaKnown RBP13.27□□□□□ -0.29
TRAF4-210ENST00000475329 CUL9Q8IWT3 2517 aa13.27□□□□□ -0.29
TRAF4-210ENST00000475329 CCDC163A0A0D9SF12 145 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 LOC100653049A0A140TA62 436 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 H0YHG0 523 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 KRT34O76011 436 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 RSL1D1O76021 490 aaKnown RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 EML2O95834 649 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 PDGFBP01127 241 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 CDH1P12830 882 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 HSD3B1P14060 373 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 SLC2A4P14672 509 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 PRPH2P23942 346 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 HSD3B2P26439 372 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 VARSP26640 1264 aaKnown RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 SHMT2P34897 504 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 ACADVLP49748 655 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 RPL38P63173 70 aaKnown RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 KCNJ2P63252 427 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 HMGCS1Q01581 520 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 DMWDQ09019 674 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 GRIK2Q13002 908 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 SLBPQ14493 270 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 HIST2H2ACQ16777 129 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 PDCD4Q53EL6 469 aaKnown RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 CATSPEREQ5SY80 951 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 HIST2H2AA3Q6FI13 130 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 GK5Q6ZS86 529 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 ZFAND4Q86XD8 727 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 ABCA7Q8IZY2 2146 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 RBM15BQ8NDT2 890 aaKnown RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 WDR20Q8TBZ3 569 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 EDAQ92838 391 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 MTFMTQ96DP5 389 aaKnown RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 CMTM7Q96FZ5 175 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 C1orf50Q9BV19 199 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 TBC1D10AQ9BXI6 508 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 ACPTQ9BZG2 426 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 MIR1-1HGQ9H1L0 117 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 C1orf21Q9H246 121 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 TCEAL2Q9H3H9 227 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 LRTM1Q9HBL6 345 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 TM9SF3Q9HD45 589 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 C1orf109Q9NX04 203 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 ASIC5Q9NY37 505 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 TAS2R1Q9NYW7 299 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 ICKQ9UPZ9 632 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 EIF3LQ9Y262 564 aaKnown RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 POLR3HQ9Y535 204 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-210ENST00000475329 GPR45Q9Y5Y3 372 aa13.26□□□□□ -0.29
TRAF4-210ENST00000475329 TMEM131Q92545 1883 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 A0A1W2PPV9 198 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 PIPSLA2A3N6 862 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 NPIPB8E9PQR5 432 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 WNT1P04628 370 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 PCNAP12004 261 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 JUNDP17535 347 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 NEK2P51955 445 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 DIO3P55073 304 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 PHEXP78562 749 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 ZNF542PQ5EBM4 170 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms