RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 HHEXQ03014 270 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TRIM68Q6AZZ1 485 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 FAM109BQ6ICB4 259 aaPredicted RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PGM2L1Q6PCE3 622 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TTC33Q6PID6 262 aaPredicted RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 RBM44Q6ZP01 1051 aaKnown RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 OSTM1Q86WC4 334 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PPP1R3BQ86XI6 285 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 LIX1LQ8IVB5 337 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 ZC3H7AQ8IWR0 971 aaKnown RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 REXO1L1PQ8IX06 675 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 MFSD2AQ8NA29 543 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PNLDC1Q8NA58 520 aaKnown RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 RPLP0P6Q8NHW5 317 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CYGBQ8WWM9 190 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 AUTS2Q8WXX7 1259 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 FIG4Q92562 907 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 EZH1Q92800 747 aaPredicted RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TANKQ92844 425 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 ERP27Q96DN0 273 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 KLF16Q9BXK1 252 aaPredicted RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CRISPLD2Q9H0B8 497 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 EXOSC4Q9NPD3 245 aaKnown RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CRNNQ9UBG3 495 aaPredicted RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 XPR1Q9UBH6 696 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 VPS29Q9UBQ0 182 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 FBXL3Q9UKT7 428 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PSMD13Q9UNM6 376 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CNTN6Q9UQ52 1028 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CAPN6Q9Y6Q1 641 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 A0A1W2PP55 124 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 A8MX80 341 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 GSC2O15499 205 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TPD52L2O43399 206 aaKnown RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 AP1G1O43747 822 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 LEFTY1O75610 366 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 VNN1O95497 513 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 OXSR1O95747 527 aaPredicted RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 MSL3P1P0C860 447 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 ATP6V1B2P21281 511 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 ITGA3P26006 1051 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 BDKRB1P46663 353 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CPA2P48052 419 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 SRP54P61011 504 aaKnown RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PPP3R1P63098 170 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PTSQ03393 145 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 HSF2Q03933 536 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CLCQ05315 142 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TRAF2Q12933 501 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 NFATC2Q13469 925 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 NSDHLQ15738 373 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CPSF6Q16630 551 aaKnown RBP eCLIP4.5□□□□□ -1.698e-7■■■■□ 22.5
CCNL1-215ENST00000474539 CYP27C1Q4G0S4 372 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 LRRC66Q68CR7 880 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TMIGD1Q6UXZ0 262 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 LINGO4Q6UY18 593 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TMPPEQ6ZT21 453 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 SIAH1Q8IUQ4 282 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TOR1AIP2Q8NFQ8 470 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 ZUFSPQ96AP4 578 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TBATAQ96M53 351 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 SGIP1Q9BQI5 828 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 GPATCH1Q9BRR8 931 aaKnown RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 DHRS4Q9BTZ2 278 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 APOOQ9BUR5 198 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 KCNK13Q9HB14 408 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PTPRHQ9HD43 1115 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PCDH12Q9NPG4 1184 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 SLAMF7Q9NQ25 335 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 SLC39A1Q9NY26 324 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PDP2Q9P2J9 529 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 HEY2Q9UBP5 337 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 MAN2B2Q9Y2E5 1009 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 SAGE2PA6NJ88 616 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PHYHO14832 338 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CYB5BO43169 146 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 DTNBO60941 627 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 SNAPC5O75971 98 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 SERPINA1P01009 418 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 HOXB9P17482 250 aaPredicted RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TFE3P19532 575 aaPredicted RBP4.5□□□□□ -1.69
CCNL1-215ENST00000474539 ITIH1P19827 911 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 VHLP40337 213 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PSMD7P51665 324 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 GPR143P51810 404 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 NKX3-2P78367 333 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 BDH1Q02338 343 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 IL18R1Q13478 541 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 NFE2L1Q14494 772 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 ARL6IP1Q15041 203 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 EXT1Q16394 746 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM259Q4ZIN3 620 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CLLU1OSQ5K130 101 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 GPRC6AQ5T6X5 926 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 FBXO42Q6P3S6 717 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 ISLR2Q6UXK2 745 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CYS1Q717R9 158 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 CUZD1Q86UP6 607 aa4.5□□□□□ -1.69
CCNL1-215ENST00000474539 PACS2Q86VP3 889 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms