RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ZCCHC8Q6NZY4 707 aaKnown RBP9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 MED27Q6P2C8 311 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 SLC23A3Q6PIS1 610 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 XKR5Q6UX68 686 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 TMEM26Q6ZUK4 368 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 SYVN1Q86TM6 617 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 LSMEM2Q8N112 164 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 NAGSQ8N159 534 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 DCBLD1Q8N8Z6 715 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 OR6C4Q8NGE1 309 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 OR52B6Q8NGF0 335 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 HMGCLL1Q8TB92 370 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 SELENOMQ8WWX9 145 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 PATE1Q8WXA2 126 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 TUBGCP3Q96CW5 907 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 MOCOSQ96EN8 888 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 C19orf60Q96EN9 201 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 CDK15Q96Q40 435 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 CENPKQ9BS16 269 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 SGPP1Q9BX95 441 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 C20orf27Q9GZN8 174 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 PELI2Q9HAT8 420 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 TCF7L2Q9NQB0 619 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 NLGN3Q9NZ94 848 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 ZNF624Q9P2J8 865 aaPredicted RBP9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 HAO1Q9UJM8 370 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 ICKQ9UPZ9 632 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 ASB1Q9Y576 335 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 PCDHGA11Q9Y5H2 935 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 OR6C74A6NCV1 312 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 ANKDD1BA6NHY2 528 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 LILRA5A6NI73 299 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 TMEM233B4DJY2 109 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 SLC28A1O00337 649 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 OR7A17O14581 309 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 KIAA0754O94854 1291 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 FKBP9O95302 570 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 FGF4P08620 206 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 C1GALT1C1LP0DN25 315 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 CDH1P12830 882 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 JUPP14923 745 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 NCF2P19878 526 aaPredicted RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 DUSP3P51452 185 aaPredicted RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 MAZP56270 477 aaKnown RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 UBE2IP63279 158 aaKnown RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 DAB2P98082 770 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 TRAF3Q13114 568 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 MAD2L1Q13257 205 aaPredicted RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 DDX39BQ13838 428 aaKnown RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 FASTKQ14296 549 aaKnown RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 SLBPQ14493 270 aaKnown RBP eCLIP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 RBBP5Q15291 538 aaKnown RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 NR6A1Q15406 480 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 NR0B2Q15466 257 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 ZRSR2Q15696 482 aaKnown RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 ATP6AP1LQ52LC2 224 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 SGO1Q5FBB7 561 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 ICE2Q659A1 982 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 ATG9BQ674R7 924 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 LETMD1Q6P1Q0 360 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 ARL14Q8N4G2 192 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 RFWD2Q8NHY2 731 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 JPH3Q8WXH2 748 aaPredicted RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 NEIL2Q969S2 332 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 COL25A1Q9BXS0 654 aaPredicted RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 EPB41L1Q9H4G0 881 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 EHD1Q9H4M9 534 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 UCK1Q9HA47 277 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 ZBTB26Q9HCK0 441 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 UCKL1Q9NWZ5 548 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 NCDNQ9UBB6 729 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 ADGRE2Q9UHX3 823 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 ZNF490Q9ULM2 529 aaPredicted RBP9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 BTRCQ9Y297 605 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 TIMM22Q9Y584 194 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 ST14Q9Y5Y6 855 aa9.92□□□□□ -0.82
PRPF38A-202ENST00000474048 UBFD1O14562 309 aaKnown RBP9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 PIP5K1BO14986 540 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 DUX1O43812 170 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 MYO1DO94832 1006 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 UBXN7O94888 489 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 PROS1P07225 676 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 LINC00032P0C843 101 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 POLR2CP19387 275 aaPredicted RBP9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 MAPK1P28482 360 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 SERPINB1P30740 379 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 FASLGP48023 281 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 ARL4DP49703 201 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 EPHA4P54764 986 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 ERVPABLB-1P60509 514 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 BTKQ06187 659 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 ZNF33BQ06732 778 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 PRDX1Q06830 199 aaKnown RBP9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 BNIP3Q12983 259 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 DOC2AQ14183 400 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 GRB7Q14451 532 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 RPS6KA2Q15349 733 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 SPDYAQ5MJ70 313 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 CES4AQ5XG92 561 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 FRG2Q64ET8 278 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms