RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SNRPEP62304 92 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 CRYZQ08257 329 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 FAM27E3Q08E93 113 aa2.55□□□□□ -2
XRN1-210ENST00000472697 TEFQ10587 303 aa2.55□□□□□ -2
XRN1-210ENST00000472697 TRAF1Q13077 416 aa2.55□□□□□ -2
XRN1-210ENST00000472697 IFT88Q13099 833 aa2.55□□□□□ -2
XRN1-210ENST00000472697 PLD1Q13393 1074 aa2.55□□□□□ -2
XRN1-210ENST00000472697 SNTB2Q13425 540 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 KRT31Q15323 416 aa2.55□□□□□ -2
XRN1-210ENST00000472697 KCNA10Q16322 511 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CCDC142Q17RM4 750 aa2.55□□□□□ -2
XRN1-210ENST00000472697 TMEM52BQ4KMG9 183 aa2.55□□□□□ -2
XRN1-210ENST00000472697 PLEKHO1Q53GL0 409 aaPredicted RBP2.55□□□□□ -2
XRN1-210ENST00000472697 HSP90AA5PQ58FG0 334 aa2.55□□□□□ -2
XRN1-210ENST00000472697 UQCC3Q6UW78 93 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CTU1Q7Z7A3 348 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 STHQ8IWL8 128 aa2.55□□□□□ -2
XRN1-210ENST00000472697 DDIASQ8IXT1 998 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ZNF34Q8IZ26 560 aa2.55□□□□□ -2
XRN1-210ENST00000472697 RELL2Q8NC24 303 aaPredicted RBP2.55□□□□□ -2
XRN1-210ENST00000472697 AGBL3Q8NEM8 1001 aa2.55□□□□□ -2
XRN1-210ENST00000472697 OR13J1Q8NGT2 312 aa2.55□□□□□ -2
XRN1-210ENST00000472697 SLC38A5Q8WUX1 472 aa2.55□□□□□ -2
XRN1-210ENST00000472697 TMEM18Q96B42 140 aa2.55□□□□□ -2
XRN1-210ENST00000472697 PRICKLE1Q96MT3 831 aaPredicted RBP2.55□□□□□ -2
XRN1-210ENST00000472697 CDK5RAP1Q96SZ6 601 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 ZCCHC3Q9NUD5 404 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 FBXO40Q9UH90 709 aa2.55□□□□□ -2
XRN1-210ENST00000472697 DAPK2Q9UIK4 370 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ABT1Q9ULW3 272 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 PCDHA7Q9UN72 937 aa2.55□□□□□ -2
XRN1-210ENST00000472697 PLEKHA6Q9Y2H5 1048 aa2.55□□□□□ -2
XRN1-210ENST00000472697 TMED7Q9Y3B3 224 aa2.55□□□□□ -2
XRN1-210ENST00000472697 IKBKGQ9Y6K9 419 aa2.55□□□□□ -2
XRN1-210ENST00000472697 TTC41PQ6P2S7 1318 aa2.54□□□□□ -2
XRN1-210ENST00000472697 PCDH11YQ9BZA8 1340 aa2.54□□□□□ -2
XRN1-210ENST00000472697 TUBGCP6Q96RT7 1819 aa2.54□□□□□ -2
XRN1-210ENST00000472697 OTOL1A6NHN0 477 aaPredicted RBP2.54□□□□□ -2
XRN1-210ENST00000472697 TMEM110-MUSTN1A8MSY1 372 aa2.54□□□□□ -2
XRN1-210ENST00000472697 STMND1H3BQB6 276 aa2.54□□□□□ -2
XRN1-210ENST00000472697 TEX46H3BTG2 121 aa2.54□□□□□ -2
XRN1-210ENST00000472697 FOXE1O00358 373 aaPredicted RBP2.54□□□□□ -2
XRN1-210ENST00000472697 FLRT2O43155 660 aa2.54□□□□□ -2
XRN1-210ENST00000472697 MLNRO43193 412 aa2.54□□□□□ -2
XRN1-210ENST00000472697 PRAMEF11O60813 436 aa2.54□□□□□ -2
XRN1-210ENST00000472697 ATG13O75143 517 aa2.54□□□□□ -2
XRN1-210ENST00000472697 DNAJB6O75190 326 aa2.54□□□□□ -2
XRN1-210ENST00000472697 PRKRAO75569 313 aaKnown RBP2.54□□□□□ -2
XRN1-210ENST00000472697 BAG3O95817 575 aa2.54□□□□□ -2
XRN1-210ENST00000472697 HIST1H2ABP04908 130 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SP9P0CG40 484 aa2.54□□□□□ -2
XRN1-210ENST00000472697 VPREB1P12018 145 aa2.54□□□□□ -2
XRN1-210ENST00000472697 HIST1H2ADP20671 130 aa2.54□□□□□ -2
XRN1-210ENST00000472697 GLRA2P23416 452 aa2.54□□□□□ -2
XRN1-210ENST00000472697 YWHAQP27348 245 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SOX10P56693 466 aa2.54□□□□□ -2
XRN1-210ENST00000472697 NXPH1P58417 271 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SIRPAP78324 504 aa2.54□□□□□ -2
XRN1-210ENST00000472697 ARF5P84085 180 aa2.54□□□□□ -2
XRN1-210ENST00000472697 PRKCZQ05513 592 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CAMK4Q16566 473 aa2.54□□□□□ -2
XRN1-210ENST00000472697 XKR3Q5GH77 459 aa2.54□□□□□ -2
XRN1-210ENST00000472697 MFSD12Q6NUT3 480 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CASC4Q6P4E1 433 aa2.54□□□□□ -2
XRN1-210ENST00000472697 AFTPHQ6ULP2 937 aa2.54□□□□□ -2
XRN1-210ENST00000472697 PLXDC2Q6UX71 529 aa2.54□□□□□ -2
XRN1-210ENST00000472697 HIST3H2AQ7L7L0 130 aa2.54□□□□□ -2
XRN1-210ENST00000472697 LINGO2Q7L985 606 aa2.54□□□□□ -2
XRN1-210ENST00000472697 BNIPLQ7Z465 357 aa2.54□□□□□ -2
XRN1-210ENST00000472697 TMEM110Q86TL2 294 aa2.54□□□□□ -2
XRN1-210ENST00000472697 VASH2Q86V25 355 aa2.54□□□□□ -2
XRN1-210ENST00000472697 FAM124AQ86V42 546 aa2.54□□□□□ -2
XRN1-210ENST00000472697 ZC3H3Q8IXZ2 948 aaKnown RBP2.54□□□□□ -2
XRN1-210ENST00000472697 MMD2Q8IY49 270 aa2.54□□□□□ -2
XRN1-210ENST00000472697 BMPERQ8N8U9 685 aa2.54□□□□□ -2
XRN1-210ENST00000472697 MAB21L3Q8N8X9 362 aa2.54□□□□□ -2
XRN1-210ENST00000472697 PNLDC1Q8NA58 520 aaKnown RBP2.54□□□□□ -2
XRN1-210ENST00000472697 OR56B2PQ8NGI1 322 aa2.54□□□□□ -2
XRN1-210ENST00000472697 DVL3Q92997 716 aaPredicted RBP2.54□□□□□ -2
XRN1-210ENST00000472697 LENG9Q96B70 501 aa2.54□□□□□ -2
XRN1-210ENST00000472697 TAAR6Q96RI8 345 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SECISBP2Q96T21 854 aaKnown RBP2.54□□□□□ -2
XRN1-210ENST00000472697 WDR77Q9BQA1 342 aaPredicted RBP2.54□□□□□ -2
XRN1-210ENST00000472697 RNF26Q9BY78 433 aaPredicted RBP2.54□□□□□ -2
XRN1-210ENST00000472697 NACAP1Q9BZK3 213 aa2.54□□□□□ -2
XRN1-210ENST00000472697 RMND5AQ9H871 391 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CLK4Q9HAZ1 481 aaKnown RBP2.54□□□□□ -2
XRN1-210ENST00000472697 TMEM184CQ9NVA4 438 aa2.54□□□□□ -2
XRN1-210ENST00000472697 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.54□□□□□ -2
XRN1-210ENST00000472697 TBC1D7Q9P0N9 293 aa2.54□□□□□ -2
XRN1-210ENST00000472697 DBNLQ9UJU6 430 aaKnown RBP2.54□□□□□ -2
XRN1-210ENST00000472697 SNX6Q9UNH7 406 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SH3GLB1Q9Y371 365 aa2.54□□□□□ -2
XRN1-210ENST00000472697 LMO7Q8WWI1 1683 aa2.54□□□□□ -2
XRN1-210ENST00000472697 QRICH2Q9H0J4 1663 aa2.54□□□□□ -2
XRN1-210ENST00000472697 DAPK1P53355 1430 aa2.54□□□□□ -2
XRN1-210ENST00000472697 COL18A1P39060 1754 aa2.54□□□□□ -2
XRN1-210ENST00000472697 LOC100509620A0A075B734 347 aa2.54□□□□□ -2
XRN1-210ENST00000472697 ARPC4-TTLL3A0A0A6YYG9 625 aa2.54□□□□□ -2
XRN1-210ENST00000472697 A0A1W2PPW3 197 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms