RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CPSF7Q8N684 471 aaKnown RBP6.53□□□□□ -1.36
HDAC1-204ENST00000471488 OR5M3Q8NGP4 307 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 OR5K2Q8NHB8 316 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 FLVCR1-AS1Q8TAF5 88 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 THAP3Q8WTV1 239 aaPredicted RBP6.53□□□□□ -1.36
HDAC1-204ENST00000471488 HEXDCQ8WVB3 486 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ASB5Q8WWX0 329 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 RND1Q92730 232 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 SLC22A18Q96BI1 424 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 TADA1Q96BN2 335 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 FAF2Q96CS3 445 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ZNF354BQ96LW1 612 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ALS2CR12Q96Q35 445 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ZNF395Q9H8N7 513 aaPredicted RBP6.53□□□□□ -1.36
HDAC1-204ENST00000471488 NPDC1Q9NQX5 325 aaPredicted RBP6.53□□□□□ -1.36
HDAC1-204ENST00000471488 GNPTGQ9UJJ9 305 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 MYO6Q9UM54 1294 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 EDARQ9UNE0 448 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 RNF6Q9Y252 685 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ZNF835Q9Y2P0 537 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 A0A0A6YYC8 382 aaPredicted RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 C5orf60A6NFR6 353 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 GABRR3A8MPY1 467 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 H7C0C1 242 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 I3L1I5 382 aaPredicted RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 LIN7AO14910 233 aaPredicted RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 PRPF4O43172 522 aaKnown RBP eCLIP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 CTSVO60911 334 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 AP2A1O95782 977 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 STATHP02808 62 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 CYP1A2P05177 515 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 CD9P21926 228 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 ACRV1P26436 265 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 MSX1P28360 303 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 CD96P40200 585 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 ATP5OP48047 213 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 GEMP55040 296 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 XIAPP98170 497 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 MAT1AQ00266 395 aaKnown RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 ACTN3Q08043 901 aaPredicted RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 HSPA14Q0VDF9 509 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 WASHC5Q12768 1159 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 KEAP1Q14145 624 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 SPARCL1Q14515 664 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 PCOLCEQ15113 449 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 CCDC181Q5TID7 509 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 TMEM211Q6ICI0 200 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 PRMT9Q6P2P2 845 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 TTC23LQ6PF05 361 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 UNC5DQ6UXZ4 953 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 LANCL3Q6ZV70 420 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 BZW1Q7L1Q6 419 aaKnown RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 ADCK2Q7Z695 626 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 BIVMQ86UB2 503 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 CRLF3Q8IUI8 442 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 TMTC1Q8IUR5 882 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 VWA5B2Q8N398 1253 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 HORMAD2Q8N7B1 307 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 LINC01555Q8NAE3 123 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 WFDC11Q8NEX6 87 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 GSDMBQ8TAX9 411 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 DTX3LQ8TDB6 740 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 PHF10Q8WUB8 498 aaKnown RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 CTNNBL1Q8WYA6 563 aaPredicted RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 DNAJC1Q96KC8 554 aaKnown RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 FRMD6Q96NE9 622 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 OLFM3Q96PB7 478 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 DMRTA2Q96SC8 542 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 TUBB6Q9BUF5 446 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 ACAT2Q9BWD1 397 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 ZNF700Q9H0M5 742 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 CLEC4MQ9H2X3 399 aaPredicted RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 C10orf88Q9H8K7 445 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 AIPL1Q9NZN9 384 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 KCNN3Q9UGI6 736 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 CDC14AQ9UNH5 594 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 PRSS21Q9Y6M0 314 aa6.52□□□□□ -1.37
HDAC1-204ENST00000471488 NCOA6Q14686 2063 aaPredicted RBP6.52□□□□□ -1.37
HDAC1-204ENST00000471488 A0A087X0T9 212 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 KRT87PA6NCN2 255 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 OR2W5A6NFC9 320 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 OR51F1A6NGY5 319 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 ADAM10O14672 748 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 SMAD7O15105 426 aaKnown RBP6.51□□□□□ -1.37
HDAC1-204ENST00000471488 PROM1O43490 865 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 MAN1A2O60476 641 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 CST8O60676 142 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 PRMT3O60678 531 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 ANXA9O76027 345 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 TOXO94900 526 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 SUN1O94901 812 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 S1PR4O95977 384 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 EPOP01588 193 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 RPN2P04844 631 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 SP1P08047 785 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 INHBBP09529 407 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 OR56A5P0C7T3 313 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 FAM228BP0C875 321 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 FOSL1P15407 271 aa6.51□□□□□ -1.37
HDAC1-204ENST00000471488 PECAM1P16284 738 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms