RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 JRKO75564 520 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 APOA4P06727 396 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 CD9P21926 228 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 CXCR2P25025 360 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 CTNNA1P35221 906 aaKnown RBP8.73□□□□□ -1.01
CPSF4-211ENST00000471455 MAGEA1P43355 309 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 MARCKSL1P49006 195 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 CDKN1CP49918 316 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-211ENST00000471455 CASP6P55212 293 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 RBPJQ06330 500 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 MSLNQ13421 630 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-211ENST00000471455 OLIG2Q13516 323 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 POU6F1Q14863 301 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 BRD3Q15059 726 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 SPA17Q15506 151 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 PARP6Q2NL67 630 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 ZXDCQ2QGD7 858 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-211ENST00000471455 AARS2Q5JTZ9 985 aaKnown RBP8.73□□□□□ -1.01
CPSF4-211ENST00000471455 SP5Q6BEB4 398 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-211ENST00000471455 DENND5AQ6IQ26 1287 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 PRMT9Q6P2P2 845 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 AFTPHQ6ULP2 937 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 KIRREL2Q6UWL6 708 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 UNC5DQ6UXZ4 953 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 RPTNQ6XPR3 784 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 LINC00696Q6ZRV3 163 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 GDF7Q7Z4P5 450 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 LINC00523Q86TU6 105 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 MCEMP1Q8IX19 187 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 KBTBD2Q8IY47 623 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 PIANPQ8IYJ0 282 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 OR11G2Q8NGC1 345 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 ASZ1Q8WWH4 475 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 RELTQ969Z4 430 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 NRTNQ99748 197 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 TRIM56Q9BRZ2 755 aaKnown RBP8.73□□□□□ -1.01
CPSF4-211ENST00000471455 SOX17Q9H6I2 414 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-211ENST00000471455 ENAMQ9NRM1 1142 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 SLC22A11Q9NSA0 550 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 IGSF5Q9NSI5 407 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 CTSFQ9UBX1 484 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 ZNF282Q9UDV7 671 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-211ENST00000471455 SLC39A10Q9ULF5 831 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 PLAGL1Q9UM63 463 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 CSAG2Q9Y5P2 127 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 DOCK10Q96BY6 2186 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 CROCCQ5TZA2 2017 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 F8P00451 2351 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 CCDC88CQ9P219 2028 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 NSG1A0A0A6YYJ2 146 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 FITM1A5D6W6 292 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 ERI2A8K979 691 aaKnown RBP8.72□□□□□ -1.01
CPSF4-211ENST00000471455 TARM1B6A8C7 271 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 AKR1B15C9JRZ8 316 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-211ENST00000471455 SRPX2O60687 465 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-211ENST00000471455 ALOX12BO75342 701 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 IPO7O95373 1038 aaKnown RBP8.72□□□□□ -1.01
CPSF4-211ENST00000471455 CRYABP02511 175 aaKnown RBP8.72□□□□□ -1.01
CPSF4-211ENST00000471455 ERVK-10P10266 1014 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 PTMSP20962 102 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 PEBP1P30086 187 aaKnown RBP8.72□□□□□ -1.01
CPSF4-211ENST00000471455 RWDD2BP57060 319 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 SPARCL1Q14515 664 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 SF1Q15637 639 aaKnown RBP8.72□□□□□ -1.01
CPSF4-211ENST00000471455 SWI5Q1ZZU3 235 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 CNSTQ6PJW8 725 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 GFRALQ6UXV0 394 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 KLHDC8BQ8IXV7 354 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 SLC22A15Q8IZD6 547 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 OR1N1Q8NGS0 311 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 OR2L8Q8NGY9 312 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 SUN3Q8TAQ9 357 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 NR4A3Q92570 626 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 KRT35Q92764 455 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 ZUFSPQ96AP4 578 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 MIEF2Q96C03 454 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 UNKQ9C0B0 810 aaKnown RBP8.72□□□□□ -1.01
CPSF4-211ENST00000471455 GOLPH3Q9H4A6 298 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 C10orf88Q9H8K7 445 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 ZNF160Q9HCG1 818 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 ZNF304Q9HCX3 659 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 BRD7Q9NPI1 651 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 CDC14AQ9UNH5 594 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 MRPS2Q9Y399 296 aaKnown RBP8.72□□□□□ -1.01
CPSF4-211ENST00000471455 POLQO75417 2590 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 CRYBG3Q68DQ2 2970 aa8.72□□□□□ -1.01
CPSF4-211ENST00000471455 HYKKA2RU49 373 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 MROH6A6NGR9 719 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 VSTM2BA6NLU5 285 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 MASP2O00187 686 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 RASGRF2O14827 1237 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 PHF2O75151 1096 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 MLYCDO95822 493 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 SERPINA7P05543 415 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 CTSBP07858 339 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 PRSS56P0CW18 603 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 COX6B1P14854 86 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 TPH1P17752 444 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 FBLP22087 321 aaKnown RBP8.71□□□□□ -1.02
CPSF4-211ENST00000471455 PSMA3P25788 255 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms