RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ESPL1Q14674 2120 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 NCF4Q15080 339 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 GRTP1Q5TC63 336 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 ZNF385CQ66K41 422 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-206ENST00000471037 ADGRD1Q6QNK2 874 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 PACS1Q6VY07 963 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 STRA8Q7Z7C7 330 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 DENND6AQ8IWF6 608 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 GOLGA6L1Q8N7Z2 621 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 ACVR1CQ8NER5 493 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 OR1L3Q8NH93 324 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 EPS8L3Q8TE67 593 aaKnown RBP8.76□□□□□ -1.01
SF3A1-206ENST00000471037 DCAKDQ8WVC6 231 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 MTBPQ96DY7 904 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 CLIP3Q96DZ5 547 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 IP6K3Q96PC2 410 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 STMN4Q9H169 189 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-206ENST00000471037 RHOJQ9H4E5 214 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 ACTR5Q9H9F9 607 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-206ENST00000471037 EURLQ9NYK6 297 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 LUZP4Q9P127 313 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 CRLS1Q9UJA2 301 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 ERRFI1Q9UJM3 462 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-206ENST00000471037 HEBP2Q9Y5Z4 205 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 PSAT1Q9Y617 370 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 COLEC10Q9Y6Z7 277 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 MED13Q9UHV7 2174 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 PCSK5Q92824 1860 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 IQANK1A0A1B0GTG1 560 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 TLDC2A0PJX2 215 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 SMIM23A6NLE4 172 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 TMEM150CB9EJG8 249 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 AGPSO00116 658 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 RGS16O15492 202 aaPredicted RBP8.75□□□□□ -1.01
SF3A1-206ENST00000471037 SGTAO43765 313 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 NDUFS3O75489 264 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 KLF7O75840 302 aaPredicted RBP8.75□□□□□ -1.01
SF3A1-206ENST00000471037 PIAS1O75925 651 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 KRT38O76015 456 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 CBX6O95503 412 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 CLDN1O95832 211 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 S1PR4O95977 384 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 SNRPAP09012 282 aaKnown RBP8.75□□□□□ -1.01
SF3A1-206ENST00000471037 HBQ1P09105 142 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 CYP2A7P20853 494 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 ACRV1P26436 265 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 SLCO1A2P46721 670 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 PREPP48147 710 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 CD151P48509 253 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 PRLHRP49683 370 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 ADARP55265 1226 aaKnown RBP8.75□□□□□ -1.01
SF3A1-206ENST00000471037 MPP1Q00013 466 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 ATP1A4Q13733 1029 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 SEMA3AQ14563 771 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 VWA5B1Q5TIE3 1220 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 FAM69BQ5VUD6 431 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 IGFL3Q6UXB1 125 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 DET1Q7L5Y6 550 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 TAS2R42Q7RTR8 314 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 ZC3HC1Q86WB0 502 aaKnown RBP8.75□□□□□ -1.01
SF3A1-206ENST00000471037 SERPINA9Q86WD7 417 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 RAB43Q86YS6 212 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 PIANPQ8IYJ0 282 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 NXPE1Q8N323 547 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 OR4E2Q8NGC2 313 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 PRR7Q8TB68 274 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 HM13Q8TCT9 377 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 HEXDCQ8WVB3 486 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 SNRNP40Q96DI7 357 aaKnown RBP8.75□□□□□ -1.01
SF3A1-206ENST00000471037 MRRFQ96E11 262 aaKnown RBP8.75□□□□□ -1.01
SF3A1-206ENST00000471037 PGM2Q96G03 612 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 TCTN2Q96GX1 697 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 VPS39Q96JC1 886 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 RBBP8Q99708 897 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 SH3GL2Q99962 352 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 CCM2Q9BSQ5 444 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 MCMBPQ9BTE3 642 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 MFRPQ9BY79 579 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 TMBIM4Q9HC24 238 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 FBXO6Q9NRD1 293 aaPredicted RBP8.75□□□□□ -1.01
SF3A1-206ENST00000471037 ZDHHC3Q9NYG2 299 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 SLC17A6Q9P2U8 582 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 PADI2Q9Y2J8 665 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 HIVEP3Q5T1R4 2406 aa8.75□□□□□ -1.01
SF3A1-206ENST00000471037 IGLV3-16A0A075B6K0 115 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 C17orf113A0A1B0GUU1 675 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 A6NL46 340 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 C9J4A7 227 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 CFAP99D6REC4 459 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 E7EQ34 232 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 F8W8V4 182 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 PRMT5O14744 637 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-206ENST00000471037 KLHL41O60662 606 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 FAM155BO75949 473 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 AHSGP02765 367 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 PRSS56P0CW18 603 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 ST6GAL1P15907 406 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 RPS3P23396 243 aaKnown RBP eCLIP8.74□□□□□ -1.012e-9■■□□□ 14.3
SF3A1-206ENST00000471037 GABRB3P28472 473 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 PRDX3P30048 256 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms