RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 LRRC56Q8IYG6 542 aaPredicted RBP9.34□□□□□ -0.91
SRRT-208ENST00000469602 DSELQ8IZU8 1212 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 NKAPQ8N5F7 415 aaKnown RBP9.34□□□□□ -0.91
SRRT-208ENST00000469602 PPFIBP2Q8ND30 876 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 IFT81Q8WYA0 676 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 STARD8Q92502 1023 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 TTC9Q92623 222 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 MR1Q95460 341 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 PDLIM5Q96HC4 596 aaKnown RBP9.34□□□□□ -0.91
SRRT-208ENST00000469602 HIST1H2AHQ96KK5 128 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 RBBP8Q99708 897 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 CPNE1Q99829 537 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 HIST1H2AJQ99878 128 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 DPH2Q9BQC3 489 aaPredicted RBP9.34□□□□□ -0.91
SRRT-208ENST00000469602 H2AFJQ9BTM1 129 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 DPH7Q9BTV6 452 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 GPR87Q9BY21 358 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 SPRTNQ9H040 489 aaPredicted RBP9.34□□□□□ -0.91
SRRT-208ENST00000469602 TSPYL1Q9H0U9 437 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 AKIRIN1Q9H9L7 192 aaPredicted RBP9.34□□□□□ -0.91
SRRT-208ENST00000469602 POPDC3Q9HBV1 291 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 SLC6A20Q9NP91 592 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 PCMTD2Q9NV79 361 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 IRAK4Q9NWZ3 460 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 STOX2Q9P2F5 926 aaPredicted RBP9.34□□□□□ -0.91
SRRT-208ENST00000469602 MTRF1LQ9UGC7 380 aaKnown RBP9.34□□□□□ -0.91
SRRT-208ENST00000469602 TAC3Q9UHF0 121 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 MTO1Q9Y2Z2 717 aaKnown RBP9.34□□□□□ -0.91
SRRT-208ENST00000469602 PCDHGA6Q9Y5G7 932 aa9.34□□□□□ -0.91
SRRT-208ENST00000469602 ZNF462Q96JM2 2506 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 IGKV1-8A0A0C4DH67 115 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 OR2A25A4D2G3 310 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 PABPN1LA6NDY0 278 aaKnown RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 NRP2O60462 931 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 KATNA1O75449 491 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 ENO2P09104 434 aaPredicted RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 PTPN4P29074 926 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 SLC12A2P55011 1212 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 AP1S2P56377 157 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 TBPL1P62380 186 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 ABATP80404 500 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 NAB1Q13506 487 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 ZNF460Q14592 562 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 CRTC2Q53ET0 693 aaPredicted RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 THEMIS2Q5TEJ8 643 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 RHBDD2Q6NTF9 364 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 AGTRAPQ6RW13 159 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 PCSK4Q6UW60 755 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 SBSNQ6UWP8 590 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 MBOAT1Q6ZNC8 495 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 RNF44Q7L0R7 432 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 RELL1Q8IUW5 271 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 CEP97Q8IW35 865 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 ZNF655Q8N720 491 aaPredicted RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 PPM1NQ8N819 430 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 LSM14AQ8ND56 463 aaKnown RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 FBF1Q8TES7 1133 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 ANKRD7Q92527 254 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 TSPAN17Q96FV3 270 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 WBP1Q96G27 269 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 ZNF285Q96NJ3 590 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 BBC3Q96PG8 261 aaPredicted RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 GPR22Q99680 433 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 SELENOSQ9BQE4 189 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 PLCD4Q9BRC7 762 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 NDC1Q9BTX1 674 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 TRIM54Q9BYV2 358 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 FAM117AQ9C073 453 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 CHST8Q9H2A9 424 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 ACTL8Q9H568 366 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 CAB39LQ9H9S4 337 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 GPAMQ9HCL2 828 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 MRPS30Q9NP92 439 aaKnown RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 CCDC177Q9NQR7 707 aaPredicted RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 ENAMQ9NRM1 1142 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 ABCF3Q9NUQ8 709 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 ARL15Q9NXU5 204 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 UTP6Q9NYH9 597 aaKnown RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 ANKMY1Q9P2S6 941 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 IKZF3Q9UKT9 509 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 NOVA2Q9UNW9 492 aaKnown RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 SRPK3Q9UPE1 567 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 MRPS18BQ9Y676 258 aaKnown RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 GCN1Q92616 2671 aaKnown RBP9.33□□□□□ -0.92
SRRT-208ENST00000469602 BSNQ9UPA5 3926 aa9.33□□□□□ -0.92
SRRT-208ENST00000469602 FITM1A5D6W6 292 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 CDC7O00311 574 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 SRPX2O60687 465 aaPredicted RBP9.32□□□□□ -0.92
SRRT-208ENST00000469602 CREG1O75629 220 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 RAB40ALP0C0E4 278 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 PRKAR1AP10644 381 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 STMN1P16949 149 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 AGXTP21549 392 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 CCND1P24385 295 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 ECHS1P30084 290 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 PHBP35232 272 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 SPRP35270 261 aaPredicted RBP9.32□□□□□ -0.92
SRRT-208ENST00000469602 GCGRP47871 477 aa9.32□□□□□ -0.92
SRRT-208ENST00000469602 RPS15P62841 145 aaKnown RBP9.32□□□□□ -0.92
SRRT-208ENST00000469602 CDC20Q12834 499 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms