RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 THAP3Q8WTV1 239 aaPredicted RBP11.6□□□□□ -0.55
UBR4-211ENST00000467272 POM121Q96HA1 1249 aa11.6□□□□□ -0.55
UBR4-211ENST00000467272 MAGEB10Q96LZ2 347 aaPredicted RBP11.6□□□□□ -0.55
UBR4-211ENST00000467272 ENKD1Q9H0I2 346 aa11.6□□□□□ -0.55
UBR4-211ENST00000467272 INTS7Q9NVH2 962 aaKnown RBP11.6□□□□□ -0.55
UBR4-211ENST00000467272 SEC14L3Q9UDX4 400 aa11.6□□□□□ -0.55
UBR4-211ENST00000467272 RIMKLBQ9ULI2 386 aa11.6□□□□□ -0.55
UBR4-211ENST00000467272 PCDHA3Q9Y5H8 950 aa11.6□□□□□ -0.55
UBR4-211ENST00000467272 CPAMD8Q8IZJ3 1885 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 NSG1A0A0A6YYJ2 146 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 PRAMEF2O60811 474 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 MFAP3LO75121 409 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 RASAL1O95294 804 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 SNRPB2P08579 225 aaKnown RBP11.59□□□□□ -0.55
UBR4-211ENST00000467272 OR56A5P0C7T3 313 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 ITGAMP11215 1152 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 AOAHP28039 575 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 VSX2P58304 361 aaPredicted RBP11.59□□□□□ -0.55
UBR4-211ENST00000467272 EIF3EP60228 445 aaKnown RBP11.59□□□□□ -0.55
UBR4-211ENST00000467272 YBX1P67809 324 aaKnown RBP11.59□□□□□ -0.55
UBR4-211ENST00000467272 OCA2Q04671 838 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 SEMA3AQ14563 771 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 SF1Q15637 639 aaKnown RBP11.59□□□□□ -0.55
UBR4-211ENST00000467272 C3AR1Q16581 482 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 SYTL3Q4VX76 610 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 HIBCHQ6NVY1 386 aaPredicted RBP11.59□□□□□ -0.55
UBR4-211ENST00000467272 H3F3CQ6NXT2 135 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 SIRT6Q8N6T7 355 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 OR2L3Q8NG85 312 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 ASZ1Q8WWH4 475 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 MVB12AQ96EY5 273 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 FAM118BQ9BPY3 351 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 CARD6Q9BX69 1037 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 OSBPL8Q9BZF1 889 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 LRRC40Q9H9A6 602 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 CIDEBQ9UHD4 219 aa11.59□□□□□ -0.55
UBR4-211ENST00000467272 IGKV1-8A0A0C4DH67 115 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 ASPDHA6ND91 283 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 OR5H15A6NDH6 313 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 ADAM10O14672 748 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 RPN2P04844 631 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 ERGP11308 486 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 IGFBP2P18065 325 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 PSMB5P28074 263 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 EMP2P54851 167 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 SNRPNP63162 240 aaKnown RBP11.58□□□□□ -0.56
UBR4-211ENST00000467272 TPM4P67936 248 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 CCSMST1Q4G0I0 132 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 ARHGEF18Q6ZSZ5 1173 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 CCDC50Q8IVM0 306 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 VSTM4Q8IW00 320 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 SIAH3Q8IW03 269 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 MTFMTQ96DP5 389 aaKnown RBP11.58□□□□□ -0.56
UBR4-211ENST00000467272 C14orf105Q9NVL8 296 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.58□□□□□ -0.56
UBR4-211ENST00000467272 STOX2Q9P2F5 926 aaPredicted RBP11.58□□□□□ -0.56
UBR4-211ENST00000467272 IMPACTQ9P2X3 320 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 SLC2A6Q9UGQ3 507 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 TINAGQ9UJW2 476 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 MEMO1Q9Y316 297 aa11.58□□□□□ -0.56
UBR4-211ENST00000467272 ACANP16112 2415 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 KRT87PA6NCN2 255 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 IQCF5A8MTL0 148 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 FOXS1O43638 330 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 ZNF189O75820 626 aaPredicted RBP11.57□□□□□ -0.56
UBR4-211ENST00000467272 STK10O94804 968 aaKnown RBP11.57□□□□□ -0.56
UBR4-211ENST00000467272 CLDN14O95500 239 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 C1orf105O95561 183 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 F10P00742 488 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 PMP22Q01453 160 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 HSPA14Q0VDF9 509 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 TBX2Q13207 712 aaPredicted RBP11.57□□□□□ -0.56
UBR4-211ENST00000467272 MUM1Q2TAK8 710 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 DARS2Q6PI48 645 aaKnown RBP11.57□□□□□ -0.56
UBR4-211ENST00000467272 CNSTQ6PJW8 725 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 TAX1BP1Q86VP1 789 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 ZC3H7AQ8IWR0 971 aaKnown RBP11.57□□□□□ -0.56
UBR4-211ENST00000467272 PRSS58Q8IYP2 241 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 MDS2Q8NDY4 140 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 ALG3Q92685 438 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 ZNF778Q96MU6 729 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 GPR137Q96N19 417 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 NPAS2Q99743 824 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 FERMT1Q9BQL6 677 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 RAB11FIP5Q9BXF6 653 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 P2RY12Q9H244 342 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 MCCC2Q9HCC0 563 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 RIC8BQ9NVN3 520 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 ZNHIT6Q9NWK9 470 aaKnown RBP11.57□□□□□ -0.56
UBR4-211ENST00000467272 PIH1D1Q9NWS0 290 aaKnown RBP11.57□□□□□ -0.56
UBR4-211ENST00000467272 ZC3H7BQ9UGR2 993 aaKnown RBP11.57□□□□□ -0.56
UBR4-211ENST00000467272 TFR2Q9UP52 801 aa11.57□□□□□ -0.56
UBR4-211ENST00000467272 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.57□□□□□ -0.56
UBR4-211ENST00000467272 CACNA1CQ13936 2221 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 A0A0J9YVX5 310 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 SYCE3A1L190 88 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 H0YGG7 62 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 SUN1O94901 812 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 GOT2P00505 430 aaKnown RBP11.56□□□□□ -0.56
UBR4-211ENST00000467272 FBLP22087 321 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms