RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 EGLN2Q96KS0 407 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 CLPBQ9H078 707 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 EPS8L2Q9H6S3 715 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 QPCTLQ9NXS2 382 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 SPATA7Q9P0W8 599 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 RNF6Q9Y252 685 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 PRG3Q9Y2Y8 225 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 IFT52Q9Y366 437 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 TESMINQ9Y4I5 508 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 DUSP11O75319 330 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 SLC25A14O95258 325 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 DBTP11182 482 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 CTPS1P17812 591 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 S100A1P23297 94 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 RGS4P49798 205 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 ZNF157P51786 506 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 NEK2P51955 445 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 ARPP19P56211 112 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 C6orf183Q5T699 404 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 DESI1Q6ICB0 168 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 TUBA3EQ6PEY2 450 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 FAM151BQ6UXP7 276 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 HORMAD1Q86X24 394 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 ZZZ3Q8IYH5 903 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 CLIP4Q8N3C7 705 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 BEND7Q8N7W2 519 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 CDADC1Q9BWV3 514 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 TPK1Q9H3S4 243 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 KIF17Q9P2E2 1029 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 MICAL3Q7RTP6 2002 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 VWA8A3KMH1 1905 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 SAGE2PA6NJ88 616 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 RFXANKO14593 260 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 KCNK5O95279 499 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 ALPIP09923 528 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 EPB42P16452 691 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 SDC1P18827 310 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 SLC19A1P41440 591 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 ARF5P84085 180 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 IQCCQ4KMZ1 466 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 SOWAHCQ53LP3 525 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 OR4F3Q6IEY1 312 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 NCEH1Q6PIU2 408 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 SERPINA11Q86U17 422 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 RASAL3Q86YV0 1011 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 PROX1Q92786 737 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 HSH2DQ96JZ2 352 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 HHIPQ96QV1 700 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 COPS4Q9BT78 406 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 NXF2Q9GZY0 626 aaKnown RBP12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 ABCG8Q9H221 673 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 RNF167Q9H6Y7 350 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 THUMPD1Q9NXG2 353 aaKnown RBP12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 CAB39Q9Y376 341 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 PCDHGA6Q9Y5G7 932 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 FAM47E-STBD1D6RA91 191 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 VIPP01282 170 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 RHOCP08134 193 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 ZNF7P17097 686 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 PTPN2P17706 415 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 RPS3P23396 243 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 KDELR2P33947 212 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 CASP3P42574 277 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 CTSKP43235 329 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 DSC1Q08554 894 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 CAMK2GQ13555 558 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 VMACQ2NL98 169 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 CTXN3Q4LDR2 81 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 TPRG1LQ5T0D9 272 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 CCDC80Q76M96 950 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 PTOV1Q86YD1 416 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 PGBD3Q8N328 593 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 ELMOD1Q8N336 334 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 PARP16Q8N5Y8 322 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 TESCQ96BS2 214 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 SLC29A3Q9BZD2 475 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 PCDHB9Q9Y5E1 797 aa12.62□□□□□ -0.39
PDZRN3-205ENST00000466780 CLDN9O95484 217 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 VNN2O95498 520 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 PRAMEF1O95521 474 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 ZDHHC11BP0C7U3 371 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 DGKAP23743 735 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 HMGCLP35914 325 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 OR1G1P47890 313 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 TWF1Q12792 350 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 GPRC6AQ5T6X5 926 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 CERS6Q6ZMG9 384 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 METTL4Q8N3J2 472 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 SEPT5Q99719 369 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 DPH2Q9BQC3 489 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 GPR63Q9BZJ6 419 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 NACA2Q9H009 215 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 AMBNQ9NP70 447 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 ITM2CQ9NQX7 267 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 PSORS1C1Q9UIG5 152 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 PIKFYVEQ9Y2I7 2098 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 ILVBLA1L0T0 632 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
PDZRN3-205ENST00000466780 INPPL1O15357 1258 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms