RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 TRAPPC5Q8IUR0 188 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 CEP97Q8IW35 865 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 TRIM48Q8IWZ4 208 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 IL22RA1Q8N6P7 574 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 DENND1AQ8TEH3 1009 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 EXTL1Q92935 676 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 BIRC8Q96P09 236 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 VPS35Q96QK1 796 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 NDNQ99608 321 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 OLFM1Q99784 485 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 P2RY12Q9H244 342 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 CCDC68Q9H2F9 335 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 CAB39LQ9H9S4 337 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 TRIM39Q9HCM9 518 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 SARS2Q9NP81 518 aaKnown RBP9.16□□□□□ -0.94
ATG3-203ENST00000465980 PCMTD2Q9NV79 361 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 SMOXQ9NWM0 555 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 NKIRAS1Q9NYS0 192 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 DCDC2Q9UHG0 476 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 TLK1Q9UKI8 766 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 TMPRSS11EQ9UL52 423 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 VWA7Q9Y334 891 aa9.16□□□□□ -0.94
ATG3-203ENST00000465980 LRRK2Q5S007 2527 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 DOPEY2Q9Y3R5 2298 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 IGLV3-16A0A075B6K0 115 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 A0A087X1B8 175 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 A0A096LPK6 155 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 KIR2DS5A0A0G2JLQ3 304 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 A0A0G2JNG1 304 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 OR52A4PA6NMU1 304 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 F8W735 103 aaPredicted RBP9.15□□□□□ -0.94
ATG3-203ENST00000465980 KIR2DS3K7RE56 304 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 PRMT5O14744 637 aaPredicted RBP9.15□□□□□ -0.94
ATG3-203ENST00000465980 KMOO15229 486 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 TM9SF1O15321 606 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 OR1I1O60431 355 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 GLRA3O75311 464 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 CDK14O94921 469 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 WISP3O95389 354 aaPredicted RBP9.15□□□□□ -0.94
ATG3-203ENST00000465980 GSTA1P08263 222 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 SLC35E2BP0CK96 405 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 COL6A2P12110 1019 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 CHN1P15882 459 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 SAT1P21673 171 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 RPL10P27635 214 aaKnown RBP9.15□□□□□ -0.94
ATG3-203ENST00000465980 PBLDP30039 288 aaPredicted RBP9.15□□□□□ -0.94
ATG3-203ENST00000465980 FMO4P31512 558 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 RPA3P35244 121 aaPredicted RBP9.15□□□□□ -0.94
ATG3-203ENST00000465980 MDH1P40925 334 aaKnown RBP9.15□□□□□ -0.94
ATG3-203ENST00000465980 NSG1P42857 185 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 CDKN2DP55273 166 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 GFERP55789 205 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 UBE2IP63279 158 aaKnown RBP9.15□□□□□ -0.94
ATG3-203ENST00000465980 SQSTM1Q13501 440 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 KIR2DS5Q14953 304 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 CTSL3PQ5NE16 218 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 RAPH1Q70E73 1250 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 LRRTM4Q86VH4 590 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 LCA5Q86VQ0 697 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 DTX1Q86Y01 620 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 ZNF547Q8IVP9 402 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 ANKRD42Q8N9B4 389 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 TCP10LQ8TDR4 215 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 SH3KBP1Q96B97 665 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 WBP1Q96G27 269 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 COPS8Q99627 209 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 DPYSL5Q9BPU6 564 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 IQCGQ9H095 443 aaKnown RBP9.15□□□□□ -0.94
ATG3-203ENST00000465980 VPS11Q9H270 941 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 POPDC3Q9HBV1 291 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 INTS9Q9NV88 658 aaKnown RBP9.15□□□□□ -0.94
ATG3-203ENST00000465980 ADAM21Q9UKJ8 722 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 GRID1Q9ULK0 1009 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 ACOT9Q9Y305 439 aa9.15□□□□□ -0.94
ATG3-203ENST00000465980 MED13Q9UHV7 2174 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 NAV2Q8IVL1 2488 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 UBR5O95071 2799 aaPredicted RBP9.14□□□□□ -0.95
ATG3-203ENST00000465980 CCDC88CQ9P219 2028 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 LILRA5A6NI73 299 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 H3BMM5 538 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 CHUKO15111 745 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 PHGDHO43175 533 aaKnown RBP9.14□□□□□ -0.95
ATG3-203ENST00000465980 VEGFDO43915 354 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 VPS26AO75436 327 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 VIPP01282 170 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 GHRHP01286 108 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 FAM87AP0C7U9 286 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 CD82P27701 267 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 SLC26A3P40879 764 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 SEPHS1P49903 392 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 TIAL1Q01085 375 aaKnown RBP eCLIP9.14□□□□□ -0.95
ATG3-203ENST00000465980 NFATC3Q12968 1075 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 GTF2H3Q13889 308 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 TUBB8Q3ZCM7 444 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 LDLRAP1Q5SW96 308 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 DCAF12Q5T6F0 453 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 GPRC6AQ5T6X5 926 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 WDR74Q6RFH5 385 aaPredicted RBP9.14□□□□□ -0.95
ATG3-203ENST00000465980 CDHR3Q6ZTQ4 885 aa9.14□□□□□ -0.95
ATG3-203ENST00000465980 CACNA2D3Q8IZS8 1091 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms