RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TARM1B6A8C7 271 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SLC16A6O15403 523 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 INSIG1O15503 277 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF821O75541 412 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 UNC5CO95185 931 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 HLA-DQB2P05538 268 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 RHOCP08134 193 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SLC2A3P11169 496 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 PIM1P11309 404 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 TGM2P21980 687 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 PTPN3P26045 913 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 IVDP26440 423 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MPGP29372 298 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 OR1E1P30953 314 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 GARSP41250 739 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 GRIA1P42261 906 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 DUSP3P51452 185 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 METAP1P53582 386 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CDH4P55283 916 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SOX8P57073 446 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 EIF3EP60228 445 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 NIPAL4Q0D2K0 466 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF267Q14586 743 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CYTH1Q15438 398 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 WHAMMP3Q1A5X7 153 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ISXQ2M1V0 245 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 PLAC9Q5JTB6 97 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 NCEH1Q6PIU2 408 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 TMCO3Q6UWJ1 677 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CHST9Q7L1S5 443 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF551Q7Z340 670 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 IQCHQ86VS3 1027 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MFN1Q8IWA4 741 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF567Q8N184 647 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 FAM71DQ8N9W8 422 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 HJURPQ8NCD3 748 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 OR2T34Q8NGX1 318 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 OR6K2Q8NGY2 324 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 OR4C6Q8NH72 309 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MAGOHBQ96A72 148 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 FAM131CQ96AQ9 280 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CCNL2Q96S94 520 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 WDR83Q9BRX9 315 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 FEM1AQ9BSK4 669 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MLPHQ9BV36 600 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 PABPC3Q9H361 631 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ANKZF1Q9H8Y5 726 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 AASDHPPTQ9NRN7 309 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 PIH1D1Q9NWS0 290 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 LHX3Q9UBR4 397 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SUN2Q9UH99 717 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 VPS51Q9UID3 782 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SLCO3A1Q9UIG8 710 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 PLA2G4CQ9UP65 541 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 U3KQA8 63 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 DOCK4Q8N1I0 1966 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ABCA12Q86UK0 2595 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 RELNP78509 3460 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 H7C0C1 242 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 KIF2AO00139 706 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 KCNN4O15554 427 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 PRAMEF11O60813 436 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CSO75390 466 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CLDN11O75508 207 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 BANF1O75531 89 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 TMEM63AO94886 807 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 TJP3O95049 919 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 DNTTP04053 509 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 FESP07332 822 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MMP2P08253 660 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 DLDP09622 509 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 RHOXF2BP0C7M4 288 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 PF4V1P10720 104 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MYF5P13349 255 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 PSMB4P28070 264 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 RBMS1P29558 406 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 RPL22P35268 128 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 RPL21P46778 160 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ATP5OP48047 213 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 KCNJ5P48544 419 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 NKX6-1P78426 367 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 PPIDQ08752 370 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 AP1B1Q10567 949 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF177Q13360 481 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CDH18Q13634 790 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 TFDP2Q14188 446 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SPARCL1Q14515 664 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 POLD3Q15054 466 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CCNG2Q16589 344 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 TTC31Q49AM3 519 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MPPE1Q53F39 396 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SLC45A4Q5BKX6 768 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 KHDC1LQ5JSQ8 128 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 TEX35Q5T0J7 233 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CCDC181Q5TID7 509 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF776Q68DI1 518 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CCDC137Q6PK04 289 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ZDHHC24Q6UX98 284 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms