RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 ARL4AP40617 200 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 ZNF165P49910 485 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 NDUFA8P51970 172 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 EFNA3P52797 238 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 TAS2R50P59544 299 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 LIPNQ5VXI9 398 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 ARRDC2Q8TBH0 407 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 ZBED6CLQ96FA7 236 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-211ENST00000463372 DHTKD1Q96HY7 919 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-211ENST00000463372 MCEEQ96PE7 176 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 ZFYVE21Q9BQ24 234 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 SNRNP25Q9BV90 132 aaKnown RBP12.56□□□□□ -0.4
C9orf3-211ENST00000463372 TRIM7Q9C029 511 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 SPTLC3Q9NUV7 552 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 RBM22Q9NW64 420 aaKnown RBP eCLIP12.56□□□□□ -0.41e-10■■■□□ 17.4
C9orf3-211ENST00000463372 CFAP45Q9UL16 551 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 KLHL20Q9Y2M5 609 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 ROS1P08922 2347 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 IGHV3-20A0A0C4DH32 117 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 FFAR3O14843 346 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 GPR42O15529 346 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 PRPF4O43172 522 aaKnown RBP eCLIP12.55□□□□□ -0.42e-7■■■■□ 25.5
C9orf3-211ENST00000463372 PEX1O43933 1283 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 UGT1A9O60656 530 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 SOX30O94993 753 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 UGT1A6P19224 532 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 CD86P42081 329 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 GRIA3P42263 894 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 VSX2P58304 361 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-211ENST00000463372 NIPAL4Q0D2K0 466 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 VEZF1Q14119 521 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 CAPRIN1Q14444 709 aaKnown RBP12.55□□□□□ -0.4
C9orf3-211ENST00000463372 WASHC2DQ5SRD0 308 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 ZNF468Q5VIY5 522 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-211ENST00000463372 SHISA5Q8N114 240 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 HM13Q8TCT9 377 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 DACH2Q96NX9 599 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 REG4Q9BYZ8 158 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 UGT1A7Q9HAW7 530 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 UGT1A10Q9HAW8 530 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 UGT1A8Q9HAW9 530 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 ALKBH4Q9NXW9 302 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.55□□□□□ -0.4
C9orf3-211ENST00000463372 OR6C2Q9NZP2 312 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 ADAM22Q9P0K1 906 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 LPAR3Q9UBY5 353 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 PCSK1NQ9UHG2 260 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 AMACRQ9UHK6 382 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 CDC14AQ9UNH5 594 aa12.55□□□□□ -0.4
C9orf3-211ENST00000463372 TPH1P17752 444 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 SERPINB6P35237 376 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 CD151P48509 253 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 GSCP56915 257 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-211ENST00000463372 PNOCQ13519 176 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 BOP1Q14137 746 aaKnown RBP12.54□□□□□ -0.4
C9orf3-211ENST00000463372 KIR2DS3Q14952 304 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 EXT1Q16394 746 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 MUM1Q2TAK8 710 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 FOXD4L5Q5VV16 416 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-211ENST00000463372 ZNF449Q6P9G9 518 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 FIGLAQ6QHK4 219 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 C20orf204Q6ZNR8 217 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 CPEB2Q7Z5Q1 589 aaKnown RBP12.54□□□□□ -0.4
C9orf3-211ENST00000463372 ZFP62Q8NB50 900 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-211ENST00000463372 M1APQ8TC57 530 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 FOXD4L4Q8WXT5 416 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-211ENST00000463372 LINC00615Q96LM1 132 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-211ENST00000463372 GSDMAQ96QA5 445 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 CDCP1Q9H5V8 836 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 SIX2Q9NPC8 291 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 IL26Q9NPH9 171 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 MKKSQ9NPJ1 570 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-211ENST00000463372 ENAMQ9NRM1 1142 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 ETNK2Q9NVF9 386 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 INTS7Q9NVH2 962 aaKnown RBP12.54□□□□□ -0.4
C9orf3-211ENST00000463372 C19orf25Q9UFG5 118 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-211ENST00000463372 ACAD8Q9UKU7 415 aa12.54□□□□□ -0.4
C9orf3-211ENST00000463372 RAI1Q7Z5J4 1906 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-211ENST00000463372 KIAA1549Q9HCM3 1950 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 H3BRJ5 948 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 NDC80O14777 642 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 GPR39O43194 453 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 SRPX2O60687 465 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-211ENST00000463372 MED26O95402 600 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 CALB1P05937 261 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 PGRP06401 933 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 NSFP46459 744 aaKnown RBP12.53□□□□□ -0.4
C9orf3-211ENST00000463372 NR0B1P51843 470 aaKnown RBP12.53□□□□□ -0.4
C9orf3-211ENST00000463372 ITGA8P53708 1063 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 RPL7AP62424 266 aaKnown RBP12.53□□□□□ -0.4
C9orf3-211ENST00000463372 ITGA9Q13797 1035 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 CCDC38Q502W7 563 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 ZDHHC20Q5W0Z9 365 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 DNAJC24Q6P3W2 148 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 DCUN1D2Q6PH85 259 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 FAM151BQ6UXP7 276 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 NT5DC3Q86UY8 548 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 ZNF677Q86XU0 584 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 CREBRFQ8IUR6 639 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 LRRC49Q8IUZ0 686 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms