RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ACPPP15309 386 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 KLC1Q07866 573 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 ATG9BQ674R7 924 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 SRRM1Q8IYB3 904 aaKnown RBP18.89■□□□□ 0.61
VARS-221ENST00000463184 KRT222Q8N1A0 295 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 RASGEF1CQ8N431 466 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 CATSPER1Q8NEC5 780 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 HMGCLL1Q8TB92 370 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 STT3BQ8TCJ2 826 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 MARVELD3Q96A59 401 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 PANX3Q96QZ0 392 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 OSBPL9Q96SU4 736 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 NAPGQ99747 312 aaPredicted RBP18.89■□□□□ 0.61
VARS-221ENST00000463184 TRIM56Q9BRZ2 755 aaKnown RBP18.89■□□□□ 0.61
VARS-221ENST00000463184 OLAHQ9NV23 265 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 ZC3H7BQ9UGR2 993 aaKnown RBP18.89■□□□□ 0.61
VARS-221ENST00000463184 SNX12Q9UMY4 172 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 TCAF1Q9Y4C2 921 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 LRBAP50851 2863 aa18.89■□□□□ 0.61
VARS-221ENST00000463184 SVILO95425 2214 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 E7EVH7 732 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 CES2O00748 559 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 MAP2K7O14733 419 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 KPNA5O15131 536 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 ZG16O60844 167 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 USP1O94782 785 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 C1orf105O95561 183 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 GRIA1P42261 906 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 TTPAP49638 278 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 SP5Q6BEB4 398 aaPredicted RBP18.88■□□□□ 0.61
VARS-221ENST00000463184 PTRHD1Q6GMV3 140 aaKnown RBP18.88■□□□□ 0.61
VARS-221ENST00000463184 KBTBD2Q8IY47 623 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 DTWD1Q8N5C7 304 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 OR1N1Q8NGS0 311 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 ZNF160Q9HCG1 818 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 CATSPERZQ9NTU4 200 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 C3orf18Q9UK00 162 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 TTC7AQ9ULT0 858 aaPredicted RBP18.88■□□□□ 0.61
VARS-221ENST00000463184 ZKSCAN5Q9Y2L8 839 aa18.88■□□□□ 0.61
VARS-221ENST00000463184 A0A0J9YVX5 310 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 DYTNA2CJ06 578 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 CTAGE9A4FU28 777 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 JRKO75564 520 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 MED26O95402 600 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 TCP1P17987 556 aaKnown RBP18.87■□□□□ 0.61
VARS-221ENST00000463184 FDXRP22570 491 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 CCNFP41002 786 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 ARG2P78540 354 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 NAA25Q14CX7 972 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 SIX1Q15475 284 aaPredicted RBP18.87■□□□□ 0.61
VARS-221ENST00000463184 MUM1Q2TAK8 710 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 ZNF324BQ6AW86 544 aaPredicted RBP18.87■□□□□ 0.61
VARS-221ENST00000463184 FRMPD2BQ6IN97 320 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 NDUFAF7Q7L592 441 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 LDB1Q86U70 411 aaPredicted RBP18.87■□□□□ 0.61
VARS-221ENST00000463184 FJX1Q86VR8 437 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 OR2L3Q8NG85 312 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 MAGEC3Q8TD91 643 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 FOPNLQ96NB1 174 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 NAP1L3Q99457 506 aaPredicted RBP18.87■□□□□ 0.61
VARS-221ENST00000463184 MIPEPQ99797 713 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 GNPTGQ9UJJ9 305 aa18.87■□□□□ 0.61
VARS-221ENST00000463184 IGLV3-12A0A075B6K2 115 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 LOC105369274A0A096LPK9 316 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 LOC102723532A0A0G2JNH3 316 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 ARHGAP10A1A4S6 786 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 LIASO43766 372 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 PSMB5P28074 263 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 NAA30Q147X3 362 aaPredicted RBP18.86■□□□□ 0.61
VARS-221ENST00000463184 OASLQ15646 514 aaKnown RBP18.86■□□□□ 0.61
VARS-221ENST00000463184 INAQ16352 499 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 CCNG2Q16589 344 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 RNF44Q7L0R7 432 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 OTOAQ7RTW8 1153 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 LRRC6Q86X45 466 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 PRSS58Q8IYP2 241 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 OR4N4Q8N0Y3 316 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 PPHLN1Q8NEY8 458 aaKnown RBP18.86■□□□□ 0.61
VARS-221ENST00000463184 OR2A1Q8NGT9 310 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 SKA2Q8WVK7 121 aaPredicted RBP18.86■□□□□ 0.61
VARS-221ENST00000463184 C1orf54Q8WWF1 131 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 ATG4AQ8WYN0 398 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 RELTQ969Z4 430 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 C8orf44Q96CB5 159 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 RUBCNLQ9H714 662 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 NFS1Q9Y697 457 aa18.86■□□□□ 0.61
VARS-221ENST00000463184 NSG1A0A0A6YYJ2 146 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 TRAV17A0A0B4J275 112 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 CD3EAPO15446 510 aaKnown RBP18.85■□□□□ 0.61
VARS-221ENST00000463184 IFNB1P01574 187 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 EIF2S1P05198 315 aaKnown RBP18.85■□□□□ 0.61
VARS-221ENST00000463184 PRR35P0CG20 571 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 ERVK-10P10266 1014 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 FBLP22087 321 aaKnown RBP18.85■□□□□ 0.61
VARS-221ENST00000463184 RPS3P23396 243 aaKnown RBP eCLIP18.85■□□□□ 0.611e-8■■■□□ 16.2
VARS-221ENST00000463184 ELAVL4P26378 380 aaKnown RBP18.85■□□□□ 0.61
VARS-221ENST00000463184 BDKRB1P46663 353 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 EMP3P54852 163 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 ETF1P62495 437 aaKnown RBP18.85■□□□□ 0.61
VARS-221ENST00000463184 VWA2Q5GFL6 755 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms