RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 HIBCHQ6NVY1 386 aaPredicted RBP16.42■□□□□ 0.22
TOP3A-202ENST00000461127 SPPL2CQ8IUH8 684 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 CCDC50Q8IVM0 306 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 OR13C4Q8NGS5 318 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 THAP3Q8WTV1 239 aaPredicted RBP16.42■□□□□ 0.22
TOP3A-202ENST00000461127 CA5BP1Q8WTZ4 195 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 ALG3Q92685 438 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 PBKQ96KB5 322 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 OSBPL9Q96SU4 736 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 C19orf43Q9BQ61 176 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 MESP1Q9BRJ9 268 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 FICDQ9BVA6 458 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 TMUB1Q9BVT8 246 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 TEKT2Q9UIF3 430 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 FAM221AA4D161 298 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 QSOX1O00391 747 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 ANXA9O76027 345 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 AP2A2O94973 939 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 ZRANB2O95218 330 aaKnown RBP eCLIP16.41■□□□□ 0.22
TOP3A-202ENST00000461127 ACADLP28330 430 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 CXCR5P32302 372 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 PMP22Q01453 160 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 PLOD1Q02809 727 aaPredicted RBP16.41■□□□□ 0.22
TOP3A-202ENST00000461127 PRMT9Q6P2P2 845 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 Q6ZPB1 254 aaPredicted RBP16.41■□□□□ 0.22
TOP3A-202ENST00000461127 TAS2R42Q7RTR8 314 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 SERPINA9Q86WD7 417 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 RCOR2Q8IZ40 523 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 EID3Q8N140 333 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 CLDN19Q8N6F1 224 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
TOP3A-202ENST00000461127 SAE1Q9UBE0 346 aaPredicted RBP16.41■□□□□ 0.22
TOP3A-202ENST00000461127 TRHDEQ9UKU6 1024 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 ZNF835Q9Y2P0 537 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 CPAMD8Q8IZJ3 1885 aa16.41■□□□□ 0.22
TOP3A-202ENST00000461127 FITM1A5D6W6 292 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 FAM227AF5H4B4 570 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 CEP104O60308 925 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 SRPX2O60687 465 aaPredicted RBP16.4■□□□□ 0.22
TOP3A-202ENST00000461127 TPBGLP0DKB5 382 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 ICAM2P13598 275 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 DRD2P14416 443 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 MC4RP32245 332 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 GRIA3P42263 894 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 EMP2P54851 167 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 EEF1A2Q05639 463 aaKnown RBP16.4■□□□□ 0.22
TOP3A-202ENST00000461127 BRD3Q15059 726 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 SYTL3Q4VX76 610 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 ZNF766Q5HY98 468 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 FIGLAQ6QHK4 219 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 ACBD4Q8NC06 268 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 ELMO1Q92556 727 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 GPR137Q96N19 417 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 ZNF285Q96NJ3 590 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 ENAMQ9NRM1 1142 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 STMN3Q9NZ72 180 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 FAM169AQ9Y6X4 670 aa16.4■□□□□ 0.22
TOP3A-202ENST00000461127 FBN3Q75N90 2809 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 IGHV1-45A0A0A0MS14 117 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 A0A1W2PQ72 361 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 HYKKA2RU49 373 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 CES2O00748 559 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 TTI1O43156 1089 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 S1PR4O95977 384 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 FTH1P02794 183 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 ABOP16442 354 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 FBLP22087 321 aaKnown RBP16.39■□□□□ 0.21
TOP3A-202ENST00000461127 ZNF140P52738 457 aaPredicted RBP16.39■□□□□ 0.21
TOP3A-202ENST00000461127 VSX2P58304 361 aaPredicted RBP16.39■□□□□ 0.21
TOP3A-202ENST00000461127 ZNF33BQ06732 778 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 SF1Q15637 639 aaKnown RBP16.39■□□□□ 0.21
TOP3A-202ENST00000461127 WASHC2DQ5SRD0 308 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 CCDC181Q5TID7 509 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 CHDHQ8NE62 594 aaPredicted RBP16.39■□□□□ 0.21
TOP3A-202ENST00000461127 PHF10Q8WUB8 498 aaKnown RBP16.39■□□□□ 0.21
TOP3A-202ENST00000461127 P3H4Q92791 437 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 CAPZA3Q96KX2 299 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 SMARCAL1Q9NZC9 954 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 COQ3Q9NZJ6 369 aa16.39■□□□□ 0.21
TOP3A-202ENST00000461127 TRBV5-4A0A0C4DH59 114 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 FOXO6A8MYZ6 492 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 IDSB3KWA1 339 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 CST8O60676 142 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 ITGAMP11215 1152 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 PECAM1P16284 738 aaPredicted RBP16.38■□□□□ 0.21
TOP3A-202ENST00000461127 PKLRP30613 574 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 CDKN1CP49918 316 aaPredicted RBP16.38■□□□□ 0.21
TOP3A-202ENST00000461127 COPS2P61201 443 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 ALDH6A1Q02252 535 aaKnown RBP16.38■□□□□ 0.21
TOP3A-202ENST00000461127 GTF3C1Q12789 2109 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 ITPRIPL1Q6GPH6 555 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 MFSD7Q6UXD7 560 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 RANBP10Q6VN20 620 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 ARHGEF18Q6ZSZ5 1173 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 DTWD1Q8N5C7 304 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 ZUFSPQ96AP4 578 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 SDCCAG3Q96C92 435 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 TREX2Q9BQ50 279 aaPredicted RBP16.38■□□□□ 0.21
TOP3A-202ENST00000461127 APOL2Q9BQE5 337 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 GBA3Q9H227 469 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms