RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SYTL3Q4VX76 610 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 ACSBG2Q5FVE4 666 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 CYHR1Q6ZMK1 362 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 AMIGO1Q86WK6 493 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 SPNS2Q8IVW8 549 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 DCUN1D3Q8IWE4 304 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 DSELQ8IZU8 1212 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 ZBTB2Q8N680 514 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 FBXO15Q8NCQ5 510 aaPredicted RBP13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 FBXO36Q8NEA4 188 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 OR4E2Q8NGC2 313 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 DENND1AQ8TEH3 1009 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 LCN9Q8WX39 176 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 MR1Q95460 341 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 IP6K3Q96PC2 410 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 LRRC1Q9BTT6 524 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 HGH1Q9BTY7 390 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 RAB17Q9H0T7 212 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 CHST8Q9H2A9 424 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 ENAMQ9NRM1 1142 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 IARS2Q9NSE4 1012 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 SLC17A6Q9P2U8 582 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 NFS1Q9Y697 457 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 POLEQ07864 2286 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 H3BMH7 237 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 GFYI3L273 518 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 IPO13O94829 963 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 TSPAN12O95859 305 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 CAPN1P07384 714 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 POLR2CP19387 275 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 PRDX3P30048 256 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 ECHS1P30084 290 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 SHMT2P34897 504 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 RAB28P51157 221 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 CSE1LP55060 971 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 CAV1Q03135 178 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 PRKG2Q13237 762 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 KCNAB1Q14722 419 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 TMED2Q15363 201 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 FAM198BQ6UWH4 519 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 TMEM126BQ8IUX1 230 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 OTUD6BQ8N6M0 293 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 ENDOVQ8N8Q3 282 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 SLC38A9Q8NBW4 561 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 GSDMBQ8TAX9 411 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 OR2A14Q96R47 310 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 DPH5Q9H2P9 285 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 SRMSQ9H3Y6 488 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 RUBCNLQ9H714 662 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 SMYD2Q9NRG4 433 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 C1GALT1Q9NS00 363 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 SPHK1Q9NYA1 384 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 DMGDHQ9UI17 866 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 CORO1CQ9ULV4 474 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 UTP11Q9Y3A2 253 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 PCDHGA10Q9Y5H3 936 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 KLK4Q9Y5K2 254 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 PSAT1Q9Y617 370 aa13.13□□□□□ -0.31
SCAMP4-206ENST00000460767 FER1L5A0AVI2 2057 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 MYO1CO00159 1063 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 MEN1O00255 615 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 WISP3O95389 354 aaPredicted RBP13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 ZBTB11O95625 1053 aaPredicted RBP13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 IGHEP01854 428 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 ALPPP05187 535 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 GABRA4P48169 554 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 SOX8P57073 446 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 GPX6P59796 221 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 CALCOCO2Q13137 446 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 CCSMST1Q4G0I0 132 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 DNTTIP2Q5QJE6 756 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 RBM20Q5T481 1227 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 Q6ZS92 163 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 RAB43Q86YS6 212 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 RELL1Q8IUW5 271 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 ANKMY2Q8IV38 441 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 ZBED8Q8IZ13 594 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 CISD2Q8N5K1 135 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 ASB11Q8WXH4 323 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 TM9SF4Q92544 642 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 GPR21Q99679 349 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 DPH2Q9BQC3 489 aaPredicted RBP13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 DHRS4Q9BTZ2 278 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 UNKQ9C0B0 810 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 XKR8Q9H6D3 395 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 SYTL2Q9HCH5 934 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 AGPAT4Q9NRZ5 378 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 RUVBL2Q9Y230 463 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 HEATR5BQ9P2D3 2071 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 F8P00451 2351 aa13.12□□□□□ -0.31
SCAMP4-206ENST00000460767 A0A1W2PPV9 198 aa13.11□□□□□ -0.31
SCAMP4-206ENST00000460767 TCRBV9S1A1TA0A576 114 aa13.11□□□□□ -0.31
SCAMP4-206ENST00000460767 ESYT3A0FGR9 886 aa13.11□□□□□ -0.31
SCAMP4-206ENST00000460767 ARHGEF33A8MVX0 844 aa13.11□□□□□ -0.31
SCAMP4-206ENST00000460767 E2F3O00716 465 aa13.11□□□□□ -0.31
SCAMP4-206ENST00000460767 RASGRF2O14827 1237 aa13.11□□□□□ -0.31
SCAMP4-206ENST00000460767 RPN2P04844 631 aa13.11□□□□□ -0.31
SCAMP4-206ENST00000460767 CHRM5P08912 532 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms