RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ZFHX4Q86UP3 3567 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 A0A096LPI6 279 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 MGAT4DA6NG13 374 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 KCNJ13O60928 360 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 SMNDC1O75940 238 aaKnown RBP eCLIP13.68□□□□□ -0.22
ERCC3-205ENST00000460485 KAT7O95251 611 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 PGRP06401 933 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 BCKDHAP12694 445 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 PRPS1L1P21108 318 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 ATP6V1B2P21281 511 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 C5AR1P21730 350 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 FASP25445 335 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 IL12AP29459 219 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 SERPINB1P30740 379 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 GJA4P35212 333 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 RPL3P39023 403 aaKnown RBP13.68□□□□□ -0.22
ERCC3-205ENST00000460485 HALP42357 657 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 TNFRSF4P43489 277 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 CTSCP53634 463 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 SRSF11Q05519 484 aaKnown RBP13.68□□□□□ -0.22
ERCC3-205ENST00000460485 CPSF6Q16630 551 aaKnown RBP eCLIP13.68□□□□□ -0.22
ERCC3-205ENST00000460485 ITPRIPL2Q3MIP1 535 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 SPIN4Q56A73 249 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 SFT2D3Q587I9 215 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 PAGE3Q5JUK9 113 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 LRIF1Q5T3J3 769 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 LPCAT4Q643R3 524 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 ATG9BQ674R7 924 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 NEK5Q6P3R8 708 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 DLEU7Q6UYE1 221 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 MBOAT1Q6ZNC8 495 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 ST13P4Q8IZP2 240 aaPredicted RBP13.68□□□□□ -0.22
ERCC3-205ENST00000460485 TMEM132CQ8N3T6 1108 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 OXR1Q8N573 874 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 C12orf76Q8N812 135 aaPredicted RBP13.68□□□□□ -0.22
ERCC3-205ENST00000460485 DCBLD1Q8N8Z6 715 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 OR2L2Q8NH16 312 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 HIC2Q96JB3 615 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 TEX37Q96LM6 180 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 PKP2Q99959 881 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 SLC39A3Q9BRY0 314 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 WRAP53Q9BUR4 548 aaKnown RBP13.68□□□□□ -0.22
ERCC3-205ENST00000460485 C9orf16Q9BUW7 83 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 FAM192AQ9GZU8 254 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 PCDHAC1Q9H158 963 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 IL1RL2Q9HB29 575 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 SIRT5Q9NXA8 310 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 WNT16Q9UBV4 365 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 ADGRE2Q9UHX3 823 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 ANAPC2Q9UJX6 822 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 CNOT6Q9ULM6 557 aaKnown RBP13.68□□□□□ -0.22
ERCC3-205ENST00000460485 SLC22A14Q9Y267 594 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 FADS3Q9Y5Q0 445 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 PCM1Q15154 2024 aa13.68□□□□□ -0.22
ERCC3-205ENST00000460485 SPTBN2O15020 2390 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 A6NHS1 94 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 LILRB5O75023 590 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 RNASEH2AO75792 299 aaKnown RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 SOD1P00441 154 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 EPHX1P07099 455 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 IL1RNP18510 177 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 S100A3P33764 101 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 SLC6A11P48066 632 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 TRPC1P48995 793 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 POLE2P56282 527 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 SFSWAPQ12872 951 aaKnown RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 CAMK2GQ13555 558 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 CAPRIN1Q14444 709 aaKnown RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 ARHGAP19Q14CB8 494 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 HIST2H2ACQ16777 129 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 RSPO4Q2I0M5 234 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 FAM174BQ3ZCQ3 159 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 XKR6Q5GH73 641 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 TBCELQ5QJ74 424 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 HIST2H2AA3Q6FI13 130 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 TRAPPC5Q8IUR0 188 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 SIX5Q8N196 739 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 BEND7Q8N7W2 519 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 FAM156AQ8NDB6 213 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 TRPV3Q8NET8 790 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 DNAJB14Q8TBM8 379 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 WDR20Q8TBZ3 569 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 SETD7Q8WTS6 366 aaKnown RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 PPWD1Q96BP3 646 aaKnown RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 CENPNQ96H22 339 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 COX14Q96I36 57 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 ZNF597Q96LX8 424 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 NSMCE2Q96MF7 247 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 HHIPQ96QV1 700 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 MYCBPQ99417 103 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 SPATA9Q9BWV2 254 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 C1QTNF7Q9BXJ2 289 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 PITHD1Q9GZP4 211 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 RSPH9Q9H1X1 276 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 GORASP2Q9H8Y8 452 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 PRSS16Q9NQE7 514 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 SPATA6Q9NWH7 488 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 FAM120CQ9NX05 1096 aaKnown RBP13.67□□□□□ -0.22
ERCC3-205ENST00000460485 VPS29Q9UBQ0 182 aa13.67□□□□□ -0.22
ERCC3-205ENST00000460485 FBXL21Q9UKT6 434 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms