RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 PTENP60484 403 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 TUBB4BP68371 445 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 PHEXP78562 749 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 GPR17Q13304 367 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 PTGISQ16647 500 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 UGCGQ16739 394 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 KRTAP24-1Q3LI83 254 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 LACTB2Q53H82 288 aaPredicted RBP3.07□□□□□ -1.92
RFC4-211ENST00000460408 SFMBT2Q5VUG0 894 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 SHEQ5VZ18 495 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 MOXD1Q6UVY6 613 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 ENPP7Q6UWV6 458 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 SLC26A9Q7LBE3 791 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 OR4K1Q8NGD4 311 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 GRAPLQ8TC17 118 aaPredicted RBP3.07□□□□□ -1.92
RFC4-211ENST00000460408 NSMAFQ92636 917 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 PROX1Q92786 737 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 THOC1Q96FV9 657 aaKnown RBP3.07□□□□□ -1.92
RFC4-211ENST00000460408 PGLYRP2Q96PD5 576 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 INPP4AQ96PE3 977 aaPredicted RBP3.07□□□□□ -1.92
RFC4-211ENST00000460408 CITED2Q99967 270 aaPredicted RBP3.07□□□□□ -1.92
RFC4-211ENST00000460408 INPP5KQ9BT40 448 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 THUMPD3Q9BV44 507 aaKnown RBP3.07□□□□□ -1.92
RFC4-211ENST00000460408 OR2B2Q9GZK3 357 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 MIS12Q9H081 205 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 SHARPINQ9H0F6 387 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 TLE6Q9H808 572 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 TRPV4Q9HBA0 871 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 ECHDC1Q9NTX5 307 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 FLRT3Q9NZU0 649 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 PTPRMP28827 1452 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 SNAPC4Q5SXM2 1469 aa3.07□□□□□ -1.92
RFC4-211ENST00000460408 MAGI1Q96QZ7 1491 aaPredicted RBP3.07□□□□□ -1.92
RFC4-211ENST00000460408 C2orf81A6NN90 581 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 LINC01565O15544 149 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 GPIP06744 558 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 CFTRP13569 1480 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 CASTP20810 708 aaKnown RBP3.06□□□□□ -1.92
RFC4-211ENST00000460408 CDH3P22223 829 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 CEACAM8P31997 349 aaPredicted RBP3.06□□□□□ -1.92
RFC4-211ENST00000460408 NKX2-1P43699 371 aaPredicted RBP3.06□□□□□ -1.92
RFC4-211ENST00000460408 HSPA2P54652 639 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 MFAP3P55082 362 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 MTCP1P56278 107 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 KLC1Q07866 573 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 HERC3Q15034 1050 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 TAZQ16635 292 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 CDO1Q16878 200 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 CTU2Q2VPK5 515 aaKnown RBP3.06□□□□□ -1.92
RFC4-211ENST00000460408 KIAA1644Q3SXP7 199 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 XKR6Q5GH73 641 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 SLC25A53Q5H9E4 307 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 TXNRD3NBQ6F5E7 133 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 NOTUMQ6P988 496 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 TMEM182Q6ZP80 229 aaPredicted RBP3.06□□□□□ -1.92
RFC4-211ENST00000460408 TRMT1LQ7Z2T5 733 aaKnown RBP3.06□□□□□ -1.92
RFC4-211ENST00000460408 ANKRD33Q7Z3H0 272 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 PIGZQ86VD9 579 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 APLFQ8IW19 511 aaPredicted RBP3.06□□□□□ -1.92
RFC4-211ENST00000460408 TEX14Q8IWB6 1497 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 EID3Q8N140 333 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 OR10V1Q8NGI7 309 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 LRRC8CQ8TDW0 803 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 HEXDCQ8WVB3 486 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 KCNE4Q8WWG9 221 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 ST6GALNAC6Q969X2 333 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 NSL1Q96IY1 281 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 CCDC3Q9BQI4 270 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 MLPHQ9BV36 600 aaPredicted RBP3.06□□□□□ -1.92
RFC4-211ENST00000460408 XAB2Q9HCS7 855 aaKnown RBP3.06□□□□□ -1.92
RFC4-211ENST00000460408 GSN-AS1Q9NRJ2 163 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 TXNDC16Q9P2K2 825 aa3.06□□□□□ -1.92
RFC4-211ENST00000460408 PMS2P5A8MQ11 134 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 C2CD4DB7Z1M9 353 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 ZNF197O14709 1029 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 SLC30A4O14863 429 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 FCGR3BO75015 233 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 DFFBO76075 338 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 DDHD2O94830 711 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 BAG3O95817 575 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 CLPTM1O96005 669 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 NGFP01138 241 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 PRSS1P07477 247 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 SUPT20HL2P0C7V6 817 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 HSD17B3P37058 310 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 WNT5AP41221 380 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 GCNT1Q02742 428 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 SCN1BQ07699 218 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 RASGEF1BQ0VAM2 473 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 TNK1Q13470 666 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 TAF13Q15543 124 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 PHKG1Q16816 387 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 PDLIM3Q53GG5 364 aaPredicted RBP3.05□□□□□ -1.92
RFC4-211ENST00000460408 OR4A47Q6IF82 309 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 FAM53AQ6NSI3 398 aaPredicted RBP3.05□□□□□ -1.92
RFC4-211ENST00000460408 SHQ1Q6PI26 577 aaKnown RBP3.05□□□□□ -1.92
RFC4-211ENST00000460408 CEACAM20Q6UY09 585 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 NRARPQ7Z6K4 114 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 CDK20Q8IZL9 346 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms