RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 FXYD6-FXYD2A0A087WZ82 144 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 RASAL1O95294 804 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 IL3P08700 152 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 XRCC1P18887 633 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 TNNI3P19429 210 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 CFL1P23528 166 aaKnown RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 FSHRP23945 695 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 CD86P42081 329 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 MXD1Q05195 221 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 ATP6AP1Q15904 470 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 ASTE1Q2TB18 679 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 MYLK3Q32MK0 819 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 NKAPLQ5M9Q1 402 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 PPP2R2DQ66LE6 453 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 DPY19L3Q6ZPD9 716 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 CHSY3Q70JA7 882 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 MON1BQ7L1V2 547 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 FSTL5Q8N475 847 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 TMBIM1Q969X1 311 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 LRRC58Q96CX6 371 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 DUSP16Q9BY84 665 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 OXCT2Q9BYC2 517 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 FXYD6Q9H0Q3 95 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 RPF2Q9H7B2 306 aaKnown RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 PIH1D1Q9NWS0 290 aaKnown RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 PAQR5Q9NXK6 330 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 MARK1Q9P0L2 795 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 SPIN1Q9Y657 262 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 RBBP6Q7Z6E9 1792 aaKnown RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 LRRN3E7EW58 273 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 SULT1C2O00338 296 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 FFAR3O14843 346 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 GPR42O15529 346 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 NME6O75414 186 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 RASGRP1O95267 797 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 ADRB2P07550 413 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 GSTM2P28161 218 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 CRADDP78560 199 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 ZCCHC12Q6PEW1 402 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 ZNF782Q6ZMW2 699 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 ZNF433Q8N7K0 673 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 ANKFN1Q8N957 763 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 OR5T2Q8NGG2 359 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 HASPINQ8TF76 798 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 MTFMTQ96DP5 389 aaKnown RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 FGFBP2Q9BYJ0 223 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 MKRN2Q9H000 416 aaKnown RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 ATXN3LQ9H3M9 355 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 LRRN3Q9H3W5 708 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 ASB8Q9H765 288 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 A0A1W2PQ67 120 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 RYKP34925 604 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 HEPACAMQ14CZ8 416 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 PIGGQ5H8A4 983 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 OR10G2Q8NGC3 310 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 CANT1Q8WVQ1 401 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 GAS2L1Q99501 681 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 TFB2MQ9H5Q4 396 aaKnown RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.53□□□□□ -0.88
UFD1-205ENST00000459854 MIOSQ9NXC5 875 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 PCDHGB2Q9Y5G2 931 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 SNX10Q9Y5X0 201 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 PKMP14618 531 aaKnown RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 DNASE1L1P49184 302 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 CDH12P55289 794 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 CAP1Q01518 475 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 KIAA1614Q5VZ46 1190 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 HACD2Q6Y1H2 254 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 SLC44A3Q8N4M1 653 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 LINC01465Q8N7H1 131 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 STYXQ8WUJ0 223 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 TSEN15Q8WW01 171 aaKnown RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 TMEM40Q8WWA1 233 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 MAELQ96JY0 434 aaKnown RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 TMEM209Q96SK2 561 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 UQCC2Q9BRT2 126 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 MYNNQ9NPC7 610 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 NPAP1Q9NZP6 1156 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 UXTQ9UBK9 157 aaPredicted RBP9.53□□□□□ -0.88
UFD1-205ENST00000459854 STYXL1Q9Y6J8 313 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 ZNF780BQ9Y6R6 833 aa9.53□□□□□ -0.88
UFD1-205ENST00000459854 MYH9P35579 1960 aaKnown RBP9.52□□□□□ -0.88
UFD1-205ENST00000459854 C5orf51A6NDU8 294 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 HCN1O60741 890 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 OXSR1O95747 527 aaPredicted RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 ATXN8OSP0DMR3 200 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 CD247P20963 164 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 PBLDP30039 288 aaPredicted RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 RPP38P78345 283 aaKnown RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 RPL6Q02878 288 aaKnown RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 GRM3Q14832 879 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 EIPR1Q53HC9 387 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 SH3PXD2AQ5TCZ1 1133 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 CCBE1Q6UXH8 406 aaPredicted RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 LRRN1Q6UXK5 716 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 RANBP3LQ86VV4 465 aaPredicted RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 DCP2Q8IU60 420 aaKnown RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 WDR48Q8TAF3 677 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 SLC2A14Q8TDB8 520 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 ELMO1Q92556 727 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms