RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 CTSVO60911 334 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 CCNDBP1O95273 360 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 ZNF37AP17032 561 aaPredicted RBP19.9■□□□□ 0.78
VARS-218ENST00000459667 TAS2R39P59534 338 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 RPS15P62841 145 aaKnown RBP19.9■□□□□ 0.78
VARS-218ENST00000459667 TBR1Q16650 682 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 PHKG1Q16816 387 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 CRTC2Q53ET0 693 aaPredicted RBP19.9■□□□□ 0.78
VARS-218ENST00000459667 ICE2Q659A1 982 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 LCN10Q6JVE6 187 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 RHBDD2Q6NTF9 364 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 MBOAT1Q6ZNC8 495 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 LRRC56Q8IYG6 542 aaPredicted RBP19.9■□□□□ 0.78
VARS-218ENST00000459667 CPNE1Q99829 537 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 ARHGAP9Q9BRR9 750 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 DPH7Q9BTV6 452 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 GPR87Q9BY21 358 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 ACTL8Q9H568 366 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 LRRC4CQ9HCJ2 640 aa19.9■□□□□ 0.78
VARS-218ENST00000459667 STOX2Q9P2F5 926 aaPredicted RBP19.9■□□□□ 0.78
VARS-218ENST00000459667 OR2A25A4D2G3 310 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 PABPN1LA6NDY0 278 aaKnown RBP19.89■□□□□ 0.77
VARS-218ENST00000459667 NRP2O60462 931 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 CREG1O75629 220 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 HIST1H2AGP0C0S8 130 aaPredicted RBP19.89■□□□□ 0.77
VARS-218ENST00000459667 HIST1H2ADP20671 130 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 PTPN4P29074 926 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 STX2P32856 288 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 ERV3-1Q14264 604 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 ZNF460Q14592 562 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 LINC00303Q3SY05 128 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 ATP1A1-AS1Q5TC04 95 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 THEMIS2Q5TEJ8 643 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 TMEM207Q6UWW9 146 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 CTAGE3PQ8IX95 158 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 IFT81Q8WYA0 676 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 HIST1H2AHQ96KK5 128 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 CATSPER2Q96P56 530 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 HIST1H2AJQ99878 128 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 DPH2Q9BQC3 489 aaPredicted RBP19.89■□□□□ 0.77
VARS-218ENST00000459667 SELENOSQ9BQE4 189 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 H2AFJQ9BTM1 129 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 NDC1Q9BTX1 674 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 CCDC177Q9NQR7 707 aaPredicted RBP19.89■□□□□ 0.77
VARS-218ENST00000459667 TXLNGQ9NUQ3 528 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 ANKMY1Q9P2S6 941 aa19.89■□□□□ 0.77
VARS-218ENST00000459667 DHCR7Q9UBM7 475 aaKnown RBP19.89■□□□□ 0.77
VARS-218ENST00000459667 DMGDHQ9UI17 866 aaKnown RBP19.89■□□□□ 0.77
VARS-218ENST00000459667 A0A0J9YVX5 310 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 TK2O00142 265 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 C1QAP02745 245 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 AGXTP21549 392 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 GP5P40197 560 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 SLC12A2P55011 1212 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 RPS18P62269 152 aaKnown RBP19.88■□□□□ 0.77
VARS-218ENST00000459667 TBPL1P62380 186 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 ABATP80404 500 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 PRDX1Q06830 199 aaKnown RBP19.88■□□□□ 0.77
VARS-218ENST00000459667 COL9A2Q14055 689 aaPredicted RBP19.88■□□□□ 0.77
VARS-218ENST00000459667 TCTE1Q5JU00 501 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 C1orf189Q5VU69 101 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 ZNF385CQ66K41 422 aaPredicted RBP19.88■□□□□ 0.77
VARS-218ENST00000459667 FAM198BQ6UWH4 519 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 RNF44Q7L0R7 432 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 NKAPQ8N5F7 415 aaKnown RBP19.88■□□□□ 0.77
VARS-218ENST00000459667 PROKR1Q8TCW9 393 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 PDLIM5Q96HC4 596 aaKnown RBP19.88■□□□□ 0.77
VARS-218ENST00000459667 RBBP8Q99708 897 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 PLCD4Q9BRC7 762 aa19.88■□□□□ 0.77
VARS-218ENST00000459667 FARSAQ9Y285 508 aaKnown RBP19.88■□□□□ 0.77
VARS-218ENST00000459667 MTO1Q9Y2Z2 717 aaKnown RBP19.88■□□□□ 0.77
VARS-218ENST00000459667 FER1L5A0AVI2 2057 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 ANKRD12Q6UB98 2062 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 IGKV1-8A0A0C4DH67 115 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 RAB40ALP0C0E4 278 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 VSX2P58304 361 aaPredicted RBP19.87■□□□□ 0.77
VARS-218ENST00000459667 POU4F1Q01851 419 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 LY6DQ14210 128 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 KBTBD12Q3ZCT8 623 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 PRAMEF13Q5VWM6 474 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 FRMPD2BQ6IN97 320 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 BORAQ6PGQ7 559 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 AGTRAPQ6RW13 159 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 PAQR7Q86WK9 346 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 CEP97Q8IW35 865 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 ENDOVQ8N8Q3 282 aaKnown RBP19.87■□□□□ 0.77
VARS-218ENST00000459667 TTC29Q8NA56 475 aaPredicted RBP19.87■□□□□ 0.77
VARS-218ENST00000459667 FBF1Q8TES7 1133 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 MED8Q96G25 268 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 ZNF285Q96NJ3 590 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 GBP5Q96PP8 586 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 ZFYVE21Q9BQ24 234 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 NLNQ9BYT8 704 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 TRIM54Q9BYV2 358 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 FAM117AQ9C073 453 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 ATG10Q9H0Y0 220 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 POPDC3Q9HBV1 291 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 GPAMQ9HCL2 828 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 ARL15Q9NXU5 204 aa19.87■□□□□ 0.77
VARS-218ENST00000459667 IKZF3Q9UKT9 509 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms