RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 RAB28P51157 221 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 RBPJQ06330 500 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 TMEM266Q2M3C6 531 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 FASTKD1Q53R41 847 aaKnown RBP2.58□□□□□ -2
SCARNA18-201ENST00000459004 RBPMS2Q6ZRY4 209 aaKnown RBP2.58□□□□□ -2
SCARNA18-201ENST00000459004 BTN2A1Q7KYR7 527 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 KRT74Q7RTS7 529 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 LRRTM1Q86UE6 522 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 RYBPQ8N488 228 aaPredicted RBP2.58□□□□□ -2
SCARNA18-201ENST00000459004 KCTD6Q8NC69 237 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 VANGL1Q8TAA9 524 aaPredicted RBP2.58□□□□□ -2
SCARNA18-201ENST00000459004 MAPK15Q8TD08 544 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 SMAP2Q8WU79 429 aaPredicted RBP2.58□□□□□ -2
SCARNA18-201ENST00000459004 ZNRF4Q8WWF5 429 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 HDAC11Q96DB2 347 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 PGAP3Q96FM1 320 aaPredicted RBP2.58□□□□□ -2
SCARNA18-201ENST00000459004 CFAP57Q96MR6 1250 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 NECTIN4Q96NY8 510 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 MUS81Q96NY9 551 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 ATOH8Q96SQ7 321 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 NKX3-1Q99801 234 aaPredicted RBP2.58□□□□□ -2
SCARNA18-201ENST00000459004 VGLL1Q99990 258 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 RBM4BQ9BQ04 359 aaKnown RBP2.58□□□□□ -2
SCARNA18-201ENST00000459004 CABLES2Q9BTV7 478 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 CDK19Q9BWU1 502 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 DGCR6LQ9BY27 220 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 PRRG4Q9BZD6 226 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 UBXN6Q9BZV1 441 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 Q9H8V8 135 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 TBC1D7Q9P0N9 293 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 BCCIPQ9P287 314 aaKnown RBP eCLIP2.58□□□□□ -2
SCARNA18-201ENST00000459004 PPP1R3CQ9UQK1 317 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 CHKBQ9Y259 395 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 PPP2R2CQ9Y2T4 447 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 ANGPTL3Q9Y5C1 460 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 COL2A1P02458 1487 aaPredicted RBP2.58□□□□□ -2
SCARNA18-201ENST00000459004 CASTOR2A6NHX0 329 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 H0YAE9 185 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 MAGEC1O60732 1142 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 KRT33AO76009 404 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 CELF2O95319 508 aaKnown RBP2.57□□□□□ -2
SCARNA18-201ENST00000459004 DUS4LO95620 317 aaKnown RBP2.57□□□□□ -2
SCARNA18-201ENST00000459004 CLDN1O95832 211 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 OR52Z1P0C646 297 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 PRKAR1AP10644 381 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 EPCAMP16422 314 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 ACHEP22303 614 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 LHCGRP22888 699 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 HLA-FP30511 346 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 MC5RP33032 325 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 OPRL1P41146 370 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 HNF4AP41235 474 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 VAMP7P51809 220 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 CYCSP99999 105 aaKnown RBP2.57□□□□□ -2
SCARNA18-201ENST00000459004 MYL7Q01449 175 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 ACSM1Q08AH1 577 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 E2F5Q15329 346 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 NPTX1Q15818 432 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 ZNF74Q16587 644 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 TCTE1Q5JU00 501 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 CST9LP1Q5W188 147 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 KRT39Q6A163 491 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 OR4A47Q6IF82 309 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 KRT80Q6KB66 452 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 IL27RAQ6UWB1 636 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 CLEC4GQ6UXB4 293 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 TDRD5Q8NAT2 981 aaKnown RBP2.57□□□□□ -2
SCARNA18-201ENST00000459004 XXYLT1Q8NBI6 393 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 SLC4A11Q8NBS3 891 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 NOA1Q8NC60 698 aaKnown RBP2.57□□□□□ -2
SCARNA18-201ENST00000459004 OR6S1Q8NH40 331 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 GATAD1Q8WUU5 269 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 APOBEC4Q8WW27 367 aaKnown RBP2.57□□□□□ -2
SCARNA18-201ENST00000459004 ROBO4Q8WZ75 1007 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 CENPTQ96BT3 561 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 C18orf12Q96KH6 178 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 C4orf45Q96LM5 186 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 NSMCE3Q96MG7 304 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 LPAR4Q99677 370 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 WWTR1Q9GZV5 400 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 GSN-AS1Q9NRJ2 163 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 PAK5Q9P286 719 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 WDR35Q9P2L0 1181 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.57□□□□□ -2
SCARNA18-201ENST00000459004 R4GN57 208 aa2.57□□□□□ -2
SCARNA18-201ENST00000459004 IGKV3D-20A0A0C4DH25 116 aa2.56□□□□□ -2
SCARNA18-201ENST00000459004 TRBV5-5A0A0J9YX44 114 aa2.56□□□□□ -2
SCARNA18-201ENST00000459004 A0A1W2PPK0 400 aa2.56□□□□□ -2
SCARNA18-201ENST00000459004 ERI2A8K979 691 aaKnown RBP2.56□□□□□ -2
SCARNA18-201ENST00000459004 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.56□□□□□ -2
SCARNA18-201ENST00000459004 P4HA2O15460 535 aa2.56□□□□□ -2
SCARNA18-201ENST00000459004 SNX3O60493 162 aa2.56□□□□□ -2
SCARNA18-201ENST00000459004 ACSL3O95573 720 aa2.56□□□□□ -2
SCARNA18-201ENST00000459004 FYNP06241 537 aa2.56□□□□□ -2
SCARNA18-201ENST00000459004 ZSCAN5DPP0CG00 497 aa2.56□□□□□ -2
SCARNA18-201ENST00000459004 CYP11B2P19099 503 aa2.56□□□□□ -2
SCARNA18-201ENST00000459004 SP100P23497 879 aaPredicted RBP2.56□□□□□ -2
SCARNA18-201ENST00000459004 CPT2P23786 658 aa2.56□□□□□ -2
SCARNA18-201ENST00000459004 EEF1DP29692 281 aaKnown RBP2.56□□□□□ -2
SCARNA18-201ENST00000459004 MMP12P39900 470 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms