RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 VSX2P58304 361 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 GRM7Q14831 915 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 CRTC2Q53ET0 693 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 MLIPQ5VWP3 458 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 ADCK2Q7Z695 626 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 NKAPQ8N5F7 415 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 OLFM1Q99784 485 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 C17orf62Q9BQA9 187 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 PHACTR1Q9C0D0 580 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 RHOJQ9H4E5 214 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 MTRF1LQ9UGC7 380 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 ADAMTS6Q9UKP5 1117 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 SNX7Q9UNH6 387 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 PDE10AQ9Y233 779 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 SNRNP200O75643 2136 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 E7ENX8 843 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 PIAS1O75925 651 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 RAB40ALP0C0E4 278 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 SFTPCP11686 197 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 RORAP35398 523 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 PGGT1BP53609 377 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 RPS18P62269 152 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 ABATP80404 500 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 DCDP81605 110 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 TAP2Q03519 686 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 PRDX1Q06830 199 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 ITPR1Q14643 2758 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 FAM214AQ32MH5 1076 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 LINC00303Q3SY05 128 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 ATP1A1-AS1Q5TC04 95 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 ICE2Q659A1 982 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 RHBDD2Q6NTF9 364 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 CEP128Q6ZU80 1094 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 SYVN1Q86TM6 617 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 ZFHX4Q86UP3 3567 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 MMGT1Q8N4V1 131 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 ENDOVQ8N8Q3 282 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 PROKR1Q8TCW9 393 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 MED8Q96G25 268 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 RUFY1Q96T51 708 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 CPNE1Q99829 537 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 NLNQ9BYT8 704 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 FAM117AQ9C073 453 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 CCDC177Q9NQR7 707 aaPredicted RBP17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 STARD5Q9NSY2 213 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 ARL15Q9NXU5 204 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 IFT80Q9P2H3 777 aaPredicted RBP17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 ANKMY1Q9P2S6 941 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 DHCR7Q9UBM7 475 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 POLHQ9Y253 713 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 PADI2Q9Y2J8 665 aa17.34■□□□□ 0.37
PDLIM2-215ENST00000456545 TCRBV9S1A1TA0A576 114 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 TERTO14746 1132 aaKnown RBP17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 RECKO95980 971 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 CTSBP07858 339 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 CD63P08962 238 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 FAM87AP0C7U9 286 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 PIM1P11309 404 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 IMPA1P29218 277 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 STX2P32856 288 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 COL9A2Q14055 689 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 WASHC2DQ5SRD0 308 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 LCN10Q6JVE6 187 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 AGTRAPQ6RW13 159 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 PCSK4Q6UW60 755 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 ZDHHC24Q6UX98 284 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 TTLL10Q6ZVT0 673 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 CYS1Q717R9 158 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 PPM1NQ8N819 430 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 APOBEC4Q8WW27 367 aaKnown RBP17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 IFT81Q8WYA0 676 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 TSPAN17Q96FV3 270 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 ZFYVE21Q9BQ24 234 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 PLCD4Q9BRC7 762 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 PCBD2Q9H0N5 130 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 ATG10Q9H0Y0 220 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 GPAMQ9HCL2 828 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 SMYD2Q9NRG4 433 aa17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 STOX2Q9P2F5 926 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-215ENST00000456545 CHD6Q8TD26 2715 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 CXorf49A8MYA2 514 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 CTSVO60911 334 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 PRB1P04280 392 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 GP5P40197 560 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 TAS2R39P59534 338 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 YBX1P67809 324 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 POU4F1Q01851 419 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 C19orf57Q0VDD7 668 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 NAE1Q13564 534 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 USP10Q14694 798 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 GLE1Q53GS7 698 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 YOD1Q5VVQ6 348 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 ZNF517Q6ZMY9 492 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 CEP112Q8N8E3 955 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 ATL1Q8WXF7 558 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 RERGQ96A58 199 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 PDLIM5Q96HC4 596 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 SLC6A20Q9NP91 592 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 CUTCQ9NTM9 273 aa17.32■□□□□ 0.36
PDLIM2-215ENST00000456545 KLK4Q9Y5K2 254 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms