RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 ZIC1Q15915 447 aa23.16■■□□□ 1.3
CPSF4-207ENST00000451876 FBXO39Q8N4B4 442 aa23.16■■□□□ 1.3
CPSF4-207ENST00000451876 LIN37Q96GY3 246 aaPredicted RBP23.16■■□□□ 1.3
CPSF4-207ENST00000451876 SLC41A2Q96JW4 573 aa23.16■■□□□ 1.3
CPSF4-207ENST00000451876 SENP1Q9P0U3 644 aa23.16■■□□□ 1.3
CPSF4-207ENST00000451876 GRID1Q9ULK0 1009 aa23.16■■□□□ 1.3
CPSF4-207ENST00000451876 HGSO14964 777 aaPredicted RBP23.15■■□□□ 1.3
CPSF4-207ENST00000451876 WDR47O94967 919 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 ZBTB11O95625 1053 aaPredicted RBP23.15■■□□□ 1.3
CPSF4-207ENST00000451876 PROCP04070 461 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 HGFP14210 728 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 NPPBP16860 134 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 PRDX1Q06830 199 aaKnown RBP23.15■■□□□ 1.3
CPSF4-207ENST00000451876 SETDB1Q15047 1291 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 LCTLQ6UWM7 567 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 THOC6Q86W42 341 aaKnown RBP23.15■■□□□ 1.3
CPSF4-207ENST00000451876 CARFQ8N187 725 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 PTGR2Q8N8N7 351 aaPredicted RBP23.15■■□□□ 1.3
CPSF4-207ENST00000451876 C19orf47Q8N9M1 422 aaKnown RBP23.15■■□□□ 1.3
CPSF4-207ENST00000451876 STRADBQ9C0K7 418 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 CUEDC1Q9NWM3 386 aaPredicted RBP23.15■■□□□ 1.3
CPSF4-207ENST00000451876 LRRC14BA6NHZ5 514 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 GOLGA6L10A6NI86 522 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 PLIN3O60664 434 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 NELFEP18615 380 aaKnown RBP23.15■■□□□ 1.3
CPSF4-207ENST00000451876 CMPK1P30085 196 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 GRIA3P42263 894 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 ALDH18A1P54886 795 aaKnown RBP23.15■■□□□ 1.3
CPSF4-207ENST00000451876 SH3BP2P78314 561 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 KCNAB1Q14722 419 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 KLHDC8AQ8IYD2 350 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 UBTD2Q8WUN7 234 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 PHF21BQ96EK2 531 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 SCNM1Q9BWG6 230 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 CD244Q9BZW8 370 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 FAM60AQ9NP50 221 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 MRPS30Q9NP92 439 aaKnown RBP23.15■■□□□ 1.3
CPSF4-207ENST00000451876 OCIAD1Q9NX40 245 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 SOHLH2Q9NX45 425 aa23.15■■□□□ 1.3
CPSF4-207ENST00000451876 MDC1Q14676 2089 aaKnown RBP23.14■■□□□ 1.3
CPSF4-207ENST00000451876 A8MT66 165 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 TMX2-CTNND1H3BSU7 103 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 TYROBPO43914 113 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 SIX3O95343 332 aaPredicted RBP23.14■■□□□ 1.29
CPSF4-207ENST00000451876 CSTF2P33240 577 aaKnown RBP eCLIP23.14■■□□□ 1.29
CPSF4-207ENST00000451876 C3orf38Q5JPI3 329 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 FCRL6Q6DN72 434 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 RAB11FIP2Q7L804 512 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 AGBL5Q8NDL9 886 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 GRAMD1AQ96CP6 724 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 CMKLR1Q99788 373 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 DPH7Q9BTV6 452 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 PCBD2Q9H0N5 130 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 CNOT10Q9H9A5 744 aaKnown RBP23.14■■□□□ 1.29
CPSF4-207ENST00000451876 SIDT1Q9NXL6 827 aaKnown RBP23.14■■□□□ 1.29
CPSF4-207ENST00000451876 SLC17A7Q9P2U7 560 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 BTRCQ9Y297 605 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 PLLPQ9Y342 182 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 LOXL2Q9Y4K0 774 aa23.14■■□□□ 1.29
CPSF4-207ENST00000451876 CCDC187A0A096LP49 1063 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 CCNT2O60583 730 aaKnown RBP23.13■■□□□ 1.29
CPSF4-207ENST00000451876 SMIM24O75264 130 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 STK16O75716 305 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 IPO13O94829 963 aaKnown RBP23.13■■□□□ 1.29
CPSF4-207ENST00000451876 FKBP9O95302 570 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 ADRB1P08588 477 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 CCL4P13236 92 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 ITIH1P19827 911 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 HSD11B2P80365 405 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 FAM129CQ86XR2 697 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 KMT5CQ86Y97 462 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 TCP10LQ8TDR4 215 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 NEIL2Q969S2 332 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 ARL8AQ96BM9 186 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 SATB2Q9UPW6 733 aa23.13■■□□□ 1.29
CPSF4-207ENST00000451876 G3V2L1 256 aa23.12■■□□□ 1.29
CPSF4-207ENST00000451876 DLX3O60479 287 aa23.12■■□□□ 1.29
CPSF4-207ENST00000451876 EBLN1P0CF75 366 aa23.12■■□□□ 1.29
CPSF4-207ENST00000451876 CCDC153Q494R4 210 aa23.12■■□□□ 1.29
CPSF4-207ENST00000451876 FIGLAQ6QHK4 219 aa23.12■■□□□ 1.29
CPSF4-207ENST00000451876 D2HGDHQ8N465 521 aa23.12■■□□□ 1.29
CPSF4-207ENST00000451876 BMPERQ8N8U9 685 aa23.12■■□□□ 1.29
CPSF4-207ENST00000451876 HAUS8Q9BT25 410 aa23.12■■□□□ 1.29
CPSF4-207ENST00000451876 IQCGQ9H095 443 aaKnown RBP23.12■■□□□ 1.29
CPSF4-207ENST00000451876 KLK4Q9Y5K2 254 aa23.12■■□□□ 1.29
CPSF4-207ENST00000451876 EFCAB7A8K855 629 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 HCRTR1O43613 425 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 CCNDBP1O95273 360 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 FGF3P11487 239 aaPredicted RBP23.11■■□□□ 1.29
CPSF4-207ENST00000451876 CDH1P12830 882 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 FOLR1P15328 257 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 EPORP19235 508 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 ETV5P41161 510 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 MLLT3P42568 568 aaPredicted RBP23.11■■□□□ 1.29
CPSF4-207ENST00000451876 ARL4DP49703 201 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 ABATP80404 500 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 CAMK2BQ13554 666 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 DEFB110Q30KQ9 67 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 ZNF425Q6IV72 752 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 C17orf64Q86WR6 236 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms