RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TK2O00142 265 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 H2AFYO75367 372 aaKnown RBP12.56□□□□□ -0.4
VPS33A-202ENST00000451053 S100BP04271 92 aaPredicted RBP12.56□□□□□ -0.4
VPS33A-202ENST00000451053 BPGMP07738 259 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 SBK3P0C264 359 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 ANKRD34CP0C6C1 535 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 ST6GAL1P15907 406 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 ATP5F1P24539 256 aaPredicted RBP12.56□□□□□ -0.4
VPS33A-202ENST00000451053 SEPHS1P49903 392 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 TRA2AQ13595 282 aaKnown RBP eCLIP12.56□□□□□ -0.4
VPS33A-202ENST00000451053 PTCHD3Q3KNS1 767 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 CDKL4Q5MAI5 379 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 KIAA1614Q5VZ46 1190 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 ZYG11AQ6WRX3 759 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 NUDCD3Q8IVD9 361 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 SLC22A9Q8IVM8 553 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 CACTIN-AS1Q8N1I8 211 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 GALNT15Q8N3T1 639 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 TMEM151AQ8N4L1 468 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 OR2A1Q8NGT9 310 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 OR56A3Q8NH54 315 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 RAB3IL1Q8TBN0 382 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 ESAMQ96AP7 390 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 SLC22A18Q96BI1 424 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 MIPEPQ99797 713 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 SGPP1Q9BX95 441 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 C12orf65Q9H3J6 166 aaKnown RBP12.56□□□□□ -0.4
VPS33A-202ENST00000451053 ZNF768Q9H5H4 540 aaKnown RBP12.56□□□□□ -0.4
VPS33A-202ENST00000451053 MLXIPLQ9NP71 852 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 WWOXQ9NZC7 414 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 SEMA5BQ9P283 1151 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 CPSF2Q9P2I0 782 aaKnown RBP12.56□□□□□ -0.4
VPS33A-202ENST00000451053 TAC3Q9UHF0 121 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 PTBP2Q9UKA9 531 aaKnown RBP12.56□□□□□ -0.4
VPS33A-202ENST00000451053 KLHL20Q9Y2M5 609 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 PCDHB11Q9Y5F2 797 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 ANKRD12Q6UB98 2062 aa12.56□□□□□ -0.4
VPS33A-202ENST00000451053 A0A0J9YY10 115 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 A0A1W2PNU3 283 aaPredicted RBP12.55□□□□□ -0.4
VPS33A-202ENST00000451053 PMS2P1A4D2B8 440 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 TARM1B6A8C7 271 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 TOX3O15405 576 aaPredicted RBP12.55□□□□□ -0.4
VPS33A-202ENST00000451053 KLK8O60259 260 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 PRAMEF10O60809 474 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 SPINK2P20155 84 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 GDF5P43026 501 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 SLC6A12P48065 614 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 HSPA7P48741 367 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 AGTR2P50052 363 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 HNMTP50135 292 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 NFKB2Q00653 900 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 SF1Q15637 639 aaKnown RBP12.55□□□□□ -0.4
VPS33A-202ENST00000451053 ZIC1Q15915 447 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 PDK4Q16654 411 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 THEMIS2Q5TEJ8 643 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 PRAMEF13Q5VWM6 474 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 SULT1C3Q6IMI6 304 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 CAPN13Q6MZZ7 669 aaPredicted RBP12.55□□□□□ -0.4
VPS33A-202ENST00000451053 OR2L3Q8NG85 312 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 PPP1R14CQ8TAE6 165 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 CKAP2Q8WWK9 683 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 KLHL6Q8WZ60 621 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 LIN37Q96GY3 246 aaPredicted RBP12.55□□□□□ -0.4
VPS33A-202ENST00000451053 SLC41A2Q96JW4 573 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 MAGEB18Q96M61 343 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 TRAPPC9Q96Q05 1148 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 OR4K3Q96R72 315 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 CAPS2Q9BXY5 557 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 CCDC134Q9H6E4 229 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 SLC6A20Q9NP91 592 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 C1GALT1Q9NS00 363 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 INTS7Q9NVH2 962 aaKnown RBP12.55□□□□□ -0.4
VPS33A-202ENST00000451053 KLK13Q9UKR3 277 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 WASF3Q9UPY6 502 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 SH2B3Q9UQQ2 575 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 ASB1Q9Y576 335 aa12.55□□□□□ -0.4
VPS33A-202ENST00000451053 CNOT1A5YKK6 2376 aaKnown RBP12.55□□□□□ -0.4
VPS33A-202ENST00000451053 ADAMTS20P59510 1910 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 LRRC14BA6NHZ5 514 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 G3V2L1 256 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 TMX2-CTNND1H3BSU7 103 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 HGSO14964 777 aaPredicted RBP12.54□□□□□ -0.4
VPS33A-202ENST00000451053 NRP2O60462 931 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 ZBTB11O95625 1053 aaPredicted RBP12.54□□□□□ -0.4
VPS33A-202ENST00000451053 GFAPP14136 432 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 MAGP20916 626 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 CCND1P24385 295 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 CMPK1P30085 196 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 GGT5P36269 586 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 GRIA3P42263 894 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 GYS2P54840 703 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 DNAJB13P59910 316 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 NAA20P61599 178 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 GUCY1A3Q02108 690 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 KCNAB1Q14722 419 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 PCLAFQ15004 111 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 PFKFB4Q16877 469 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 LIPMQ5VYY2 423 aa12.54□□□□□ -0.4
VPS33A-202ENST00000451053 ICE2Q659A1 982 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms