RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 PRKCHP24723 683 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DDX6P26196 483 aaKnown RBP eCLIP2.16□□□□□ -2.06
USP53-202ENST00000450251 L1CAMP32004 1257 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FEN1P39748 380 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 CRATP43155 626 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PER3P56645 1201 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CRYZQ08257 329 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 FOXO1Q12778 655 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TRAM2Q15035 370 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MAPKAPK3Q16644 382 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PPP1R3AQ16821 1122 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FAM214AQ32MH5 1076 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PROX2Q3B8N5 592 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PTCHD3Q3KNS1 767 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MSS51Q4VC12 460 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RFTN2Q52LD8 501 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 LYPLAL1Q5VWZ2 237 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SHEQ5VZ18 495 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OLFML2AQ68BL7 652 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HIST2H2AA3Q6FI13 130 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RHBDF2Q6PJF5 856 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CHST15Q7LFX5 561 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 METTL23Q86XA0 190 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FUNDC1Q8IVP5 155 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NAXDQ8IW45 347 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZC3H3Q8IXZ2 948 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ARMC10Q8N2F6 343 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 GHDCQ8N2G8 530 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 STK40Q8N2I9 435 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 Q8N402 240 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RNF148Q8N7C7 305 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CLDN22Q8N7P3 220 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 YIPF7Q8N8F6 280 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SLAIN1Q8ND83 568 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OR4Q3Q8NH05 313 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 AKR7LQ8NHP1 331 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 STAG3L4Q8TBR4 150 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HAVCR2Q8TDQ0 301 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HTR3CQ8WXA8 447 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 LPAR1Q92633 364 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HLA-CQ95604 372 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 EEF2KMTQ96G04 330 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SERAC1Q96JX3 654 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HSFY1Q96LI6 401 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZCCHC2Q9C0B9 1178 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 NXF2Q9GZY0 626 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 FXYD6Q9H0Q3 95 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 IL25Q9H293 177 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OR51J1Q9H342 316 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 C11orf49Q9H6J7 331 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MEAF6Q9HAF1 191 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SP110Q9HB58 689 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MYNNQ9NPC7 610 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 IL1RAPQ9NPH3 570 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 BRD7Q9NPI1 651 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SNTG1Q9NSN8 517 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 GJB4Q9NTQ9 266 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ABCB8Q9NUT2 735 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KLHL11Q9NVR0 708 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FAM118AQ9NWS6 357 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 THUMPD1Q9NXG2 353 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 RBAKQ9NYW8 714 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 HSFX1Q9UBD0 423 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FBXO5Q9UKT4 447 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 COPS3Q9UNS2 423 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NOD1Q9Y239 953 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PADI2Q9Y2J8 665 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KPTNQ9Y664 436 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CACNG2Q9Y698 323 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MYO5AQ9Y4I1 1855 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 TUBGCP6Q96RT7 1819 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 CICQ96RK0 1608 aaPredicted RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 A0A0A6YYH2 397 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 A6NJ64 397 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 TMEM210A6NLX4 147 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 SMLR1H3BR10 107 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 EIF1AYO14602 144 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 PRODHO43272 600 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 GPR37L1O60883 481 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 GATBO75879 557 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 OTCP00480 354 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 EGFP01133 1207 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 UROSP10746 265 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 MYCLP12524 364 aaPredicted RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 YBX3P16989 372 aaKnown RBP eCLIP2.15□□□□□ -2.06
USP53-202ENST00000450251 CHRNB2P17787 502 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 ATF3P18847 181 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 ATP5C1P36542 298 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 EIF1AXP47813 144 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 TGM4P49221 684 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 PEX3P56589 373 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 ERVFC1P60507 584 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 AP1S1P61966 158 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 FOXK1P85037 733 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 CYCSP99999 105 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 TSTQ16762 297 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 PAN2Q504Q3 1202 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 TEX44Q53QW1 395 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 PPP1R26Q5T8A7 1209 aaPredicted RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 PRAMEF17Q5VTA0 474 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms